RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	SAP30L	Q9HAJ7	183 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	AGO4	Q9HCK5	861 aa	Known RBP	5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	ZNF304	Q9HCX3	659 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	SH3GLB2	Q9NR46	395 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	WWOX	Q9NZC7	414 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	TBC1D7	Q9P0N9	293 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	SNX13	Q9Y5W8	968 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	PEG3	Q9GZU2	1588 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	KANK1	Q14678	1352 aa		5.04	□□□□□ -1.6
CCDC66-222	ENST00000494672	CNTNAP2	Q9UHC6	1331 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	IGLV5-39	A0A0G2JS06	123 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	GOLGA6L10	A0A0M3HER8	536 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	RRH	O14718	337 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	THAP12	O43422	761 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	TSPAN6	O43657	245 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	MBP	P02686	304 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	TSPY4	P0CV99	314 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	TSPY10	P0CW01	314 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	RPS6KB1	P23443	525 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	DUSP1	P28562	367 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	MAP2K2	P36507	400 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	RPS6KA3	P51812	740 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	CSE1L	P55060	971 aa	Known RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	ICA1	Q05084	483 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SEMA5A	Q13591	1074 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SEMA3A	Q14563	771 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	POSTN	Q15063	836 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	GRAMD1B	Q3KR37	738 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	AASDH	Q4L235	1098 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	WDR45B	Q5MNZ6	344 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	HYI	Q5T013	277 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SFMBT2	Q5VUG0	894 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	CCDC30	Q5VVM6	783 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	TTC19	Q6DKK2	380 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SEPT14	Q6ZU15	432 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	KRT28	Q7Z3Y7	464 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	ANKRD20A12P	Q8NF67	263 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	GSDMB	Q8TAX9	411 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	WIPF2	Q8TF74	440 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	ABHD5	Q8WTS1	349 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	ANKRD49	Q8WVL7	239 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	IGFBPL1	Q8WX77	278 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	P2RY11	Q96G91	374 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	TUBB6	Q9BUF5	446 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	VPS33B	Q9H267	617 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SEMA4B	Q9NPR2	832 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	HEYL	Q9NQ87	328 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	PRDM11	Q9NQV5	511 aa		5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.03	□□□□□ -1.6
CCDC66-222	ENST00000494672	RNF123	Q5XPI4	1314 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	CCDC187	A0A096LP49	1063 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	LINC00854	A0A1B0GVQ3	168 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	CCNT2	O60583	730 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	TOMM40	O96008	361 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	SLC3A2	P08195	630 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	RHCE	P18577	417 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	VPS41	P49754	854 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	RHD	Q02161	417 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	NUCB1	Q02818	461 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	KCNJ12	Q14500	433 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	SPDYC	Q5MJ68	293 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	RBM44	Q6ZP01	1051 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	NEK10	Q6ZWH5	1172 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	MEPCE	Q7L2J0	689 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	BRSK1	Q8TDC3	778 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	SH3KBP1	Q96B97	665 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	IQCD	Q96DY2	449 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	NLRP4	Q96MN2	994 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	SCLT1	Q96NL6	688 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	RNF26	Q9BY78	433 aa	Predicted RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	ZNF700	Q9H0M5	742 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	TAOK3	Q9H2K8	898 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	HIPK2	Q9H2X6	1198 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	UPF2	Q9HAU5	1272 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	ZBTB26	Q9HCK0	441 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	PNPLA8	Q9NP80	782 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	TCF7L2	Q9NQB0	619 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	PDRG1	Q9NUG6	133 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	ABHD10	Q9NUJ1	306 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	VPS4A	Q9UN37	437 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	JRKL	Q9Y4A0	524 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	SNX5	Q9Y5X3	404 aa		5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	DHX29	Q7Z478	1369 aa	Known RBP	5.02	□□□□□ -1.61
CCDC66-222	ENST00000494672	C2orf81	A6NN90	581 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	C16orf96	A6NNT2	1141 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672		F8W810	466 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672		F8W8V4	182 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	ZSCAN9	O15535	394 aa	Predicted RBP	5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	TRIM21	P19474	475 aa	Known RBP	5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	HOXA7	P31268	230 aa	Predicted RBP	5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	HSPA4	P34932	840 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	PBX1	P40424	430 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	USP8	P40818	1118 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	BPIFB3	P59826	476 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	RAE1	P78406	368 aa	Known RBP	5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	DDX10	Q13206	875 aa	Known RBP	5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	FHL3	Q13643	280 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	ARHGEF6	Q15052	776 aa		5.01	□□□□□ -1.61
CCDC66-222	ENST00000494672	SYCP1	Q15431	976 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms