RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CACNA1BQ00975 2339 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 TARSL2A2RTX5 802 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 PAGE1O75459 146 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 DAB1O75553 588 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 RNASEH2AO75792 299 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 CNTN5O94779 1100 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ADCY5O95622 1261 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 MMEP08473 750 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 UCHL3P15374 230 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 VAV1P15498 845 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ZNF18P17022 549 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 EEF1GP26641 437 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 SLC8A1P32418 973 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 NNMTP40261 264 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 MATKP42679 507 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 GALCP54803 685 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 BNC1Q01954 994 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ZBTB16Q05516 673 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 DEUP1Q05D60 604 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ZNF177Q13360 481 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 CST6Q15828 149 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ST3GAL2Q16842 350 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 HLA-BQ31612 363 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ACCSLQ4AC99 568 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 FAM102AQ5T9C2 384 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 SLC26A9Q7LBE3 791 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 OR52K2Q8NGK3 314 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 C1orf216Q8TAB5 229 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 SETD7Q8WTS6 366 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 BIRC7Q96CA5 298 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 TBCBQ99426 244 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 NPY6RQ99463 290 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 TKTL2Q9H0I9 626 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 PABPC3Q9H361 631 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 GAREM1Q9H706 876 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 FBRSQ9HAH7 460 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 SGK2Q9HBY8 427 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 NLRC4Q9NPP4 1024 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ANLNQ9NQW6 1124 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 PIGVQ9NUD9 493 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 DNAAF2Q9NVR5 837 aaKnown RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 SERGEFQ9UGK8 458 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
MSH5-218ENST00000494646 KMT2BQ9UMN6 2715 aaPredicted RBP9.89□□□□□ -0.83
MSH5-218ENST00000494646 TDRD6O60522 2096 aaKnown RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 EDDM13A0A1B0GTR0 161 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 A0A1B0GVM2 712 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 TCAF2A6NFQ2 919 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 UPK3BL1B0FP48 263 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 UPK3BL2E5RIL1 263 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 I6L893 689 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 PLK4O00444 970 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 HYAL3O43820 417 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 BNIP3LO60238 219 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 SRGAP2O75044 1071 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 GJB3O75712 270 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 GFPT2O94808 682 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 IL1BP01584 269 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 C1QTNF9P0C862 333 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 GABRB2P47870 512 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 PSMD8P48556 350 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 POLR2FP61218 127 aaKnown RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 SHC2P98077 582 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 SLC12A1Q13621 1099 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 KRT31Q15323 416 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 TRIP6Q15654 476 aaKnown RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 KIF19Q2TAC6 998 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 TTC31Q49AM3 519 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 ALFQ53S48 1182 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 CT47A1Q5JQC4 288 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 PRAMEF14Q5SWL7 426 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 OTUD1Q5VV17 481 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 CXorf57Q6NSI4 855 aaKnown RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 LAYNQ6UX15 382 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 CLEC17AQ6ZS10 378 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 SND1Q7KZF4 910 aaKnown RBP eCLIP9.88□□□□□ -0.83
MSH5-218ENST00000494646 XYLT1Q86Y38 959 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 ZDHHC17Q8IUH5 632 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 CHCHD4Q8N4Q1 142 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 PNPLA1Q8N8W4 532 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 KDM1BQ8NB78 822 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 SLC20A1Q8WUM9 679 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 FEM1AQ9BSK4 669 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 SCNM1Q9BWG6 230 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 ZDHHC5Q9C0B5 715 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 TM9SF3Q9HD45 589 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 FAM207AQ9NSI2 230 aaPredicted RBP9.88□□□□□ -0.83
MSH5-218ENST00000494646 SNX11Q9Y5W9 270 aa9.88□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3DA0A087WVF3 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3IA0A087WXS9 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3EA0A087X179 549 aa9.87□□□□□ -0.83
MSH5-218ENST00000494646 TBC1D3KA0A087X1G2 549 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms