RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CCDC110Q8TBZ0 833 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ADAMTS19Q8TE59 1207 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 UBLCP1Q8WVY7 318 aaPredicted RBP6.97□□□□□ -1.29
MSH5-217ENST00000494458 IGSF8Q969P0 613 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ATP6V1G3Q96LB4 118 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ZYG11BQ9C0D3 744 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SLC39A8Q9C0K1 460 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 RNF38Q9H0F5 515 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 CYP4F11Q9HBI6 524 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 RAB6BQ9NRW1 208 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 TRPM5Q9NZQ8 1165 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 COX16Q9P0S2 106 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 PRKAG2Q9UGJ0 569 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SLC12A6Q9UHW9 1150 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 ADAM21Q9UKJ8 722 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 NUDT5Q9UKK9 219 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 SLC4A7Q9Y6M7 1214 aa6.97□□□□□ -1.29
MSH5-217ENST00000494458 CXorf51AA0A1B0GTR3 108 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SLC12A8A0AV02 714 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 LCHNA4D1U4 455 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SRRM3A6NNA2 597 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 A6NNZ2 444 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 RNF103O00237 685 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 C2CD2LO14523 706 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 TRDMT1O14717 391 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 ACSL4O60488 711 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SHOX2O60902 331 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 SPAG6O75602 509 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 STC2O76061 302 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ALDH1A2O94788 518 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CXCL14O95715 111 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 APOEP02649 317 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ADH1AP07327 375 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 MYZAPP0CAP1 466 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 DNAJB1P25685 340 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 DNAJB2P25686 324 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ACTN2P35609 894 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 MAPKAPK2P49137 400 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 KCNQ1P51787 676 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CLCN4P51793 760 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 EPHB3P54753 998 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 YBEYP58557 167 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 GABPB1Q06547 395 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 TWF1Q12792 350 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 HNRNPDQ14103 355 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 FASTKD3Q14CZ7 662 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 TUBB8Q3ZCM7 444 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CCDC38Q502W7 563 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ALFQ53S48 1182 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CEP85LQ5SZL2 805 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SPOUT1Q5T280 376 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 STEAP4Q687X5 459 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ALG1LQ6GMV1 187 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 LRRC8BQ6P9F7 803 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 Q6ZNB5 142 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CCDC149Q6ZUS6 474 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 GAREM2Q75VX8 874 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 B4GALNT4Q76KP1 1039 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 IGDCC3Q8IVU1 814 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 CCDC13Q8IYE1 715 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CNPY4Q8N129 248 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 RIBC1Q8N443 379 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 KIAA1958Q8N8K9 716 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SLC22A17Q8WUG5 538 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ARNTL2Q8WYA1 636 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 RNF34Q969K3 372 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 MYEOVQ96EZ4 313 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ZNF419Q96HQ0 510 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 FCRL5Q96RD9 977 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 FERMT1Q9BQL6 677 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SIK2Q9H0K1 926 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ARNT2Q9HBZ2 717 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 XAB2Q9HCS7 855 aaKnown RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 ZNF334Q9HCZ1 680 aaPredicted RBP6.96□□□□□ -1.3
MSH5-217ENST00000494458 MOCS1Q9NZB8 636 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 SLC24A2Q9UI40 661 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 RABGEF1Q9UJ41 708 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 TBC1D30Q9Y2I9 924 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 ACTL7BQ9Y614 415 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 CHD5Q8TDI0 1954 aa6.96□□□□□ -1.3
MSH5-217ENST00000494458 DOCK4Q8N1I0 1966 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 A0A087WUV0 522 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZBBXA8MT70 800 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 RASGRF2O14827 1237 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ZBTB24O43167 697 aaPredicted RBP6.95□□□□□ -1.3
MSH5-217ENST00000494458 PSMD3O43242 534 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 TLL1O43897 1013 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MOSPD3O75425 235 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CNTN5O94779 1100 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 ARHGEF15O94989 841 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 MAP3K6O95382 1288 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 AP2A1O95782 977 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 AGTP01019 485 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 SRGAP2BP0DMP2 458 aa6.95□□□□□ -1.3
MSH5-217ENST00000494458 CCNB1P14635 433 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms