RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ABCB4P21439 1286 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 RRM1P23921 792 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 NTSR1P30989 418 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 CD70P32970 193 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 RDXP35241 583 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 HDAC4P56524 1084 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 RPL7AP62424 266 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 OGDHQ02218 1023 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 LMAN2Q12907 356 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TBX2Q13207 712 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 AUHQ13825 339 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TRIM14Q14142 442 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 EIF4HQ15056 248 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 FUT11Q495W5 492 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 FSCBQ5H9T9 825 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 EOGTQ5NDL2 527 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 MANEALQ5VSG8 457 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 PPP1R2P3Q6NXS1 205 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SND1Q7KZF4 910 aaKnown RBP eCLIP9.05□□□□□ -0.964e-16■■■■□ 19.8
ITGB1-217ENST00000494395 STRADAQ7RTN6 431 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 ASCL5Q7RTU5 278 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TRMT11Q7Z4G4 463 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 C14orf80Q86SX3 495 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 LONP2Q86WA8 852 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 CIR1Q86X95 450 aaPredicted RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 FAM131BQ86XD5 332 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 CFAP52Q8N1V2 620 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 MDGA1Q8NFP4 955 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 OR52K2Q8NGK3 314 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 WFIKKN2Q8TEU8 576 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 CPLX3Q8WVH0 158 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 IGSF8Q969P0 613 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SELENOOQ9BVL4 669 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TKTL2Q9H0I9 626 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 EPC1Q9H2F5 836 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SEMA4AQ9H3S1 761 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 WDCPQ9H6R7 721 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 ABCB8Q9NUT2 735 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 ELOVL2Q9NXB9 296 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TOR4AQ9NXH8 423 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF212Q9UDV6 495 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SLC12A6Q9UHW9 1150 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 SLC8A2Q9UPR5 921 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 NEU3Q9UQ49 428 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.05□□□□□ -0.967e-11■□□□□ 11.2
ITGB1-217ENST00000494395 BZW2Q9Y6E2 419 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 USP34Q70CQ2 3546 aa9.05□□□□□ -0.96
ITGB1-217ENST00000494395 TNRC6BQ9UPQ9 1833 aaKnown RBP9.05□□□□□ -0.96
ITGB1-217ENST00000494395 A0A087X0T9 212 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 A0A1B0GVM2 712 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TCAF2A6NFQ2 919 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TMCO5BA8MYB1 307 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 WASH3PC4AMC7 463 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 F5H5T6 163 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 NPC1O15118 1278 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 CCP110O43303 1012 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 MFAP3LO75121 409 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 RTN2O75298 545 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 LUC7L3O95232 432 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZIC2O95409 532 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 APBB3O95704 486 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 FTLP02792 175 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TPM3P06753 285 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 FAM228BP0C875 321 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 GPD1P21695 349 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 SDC4P31431 198 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 IL12RB1P42701 662 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 SERPINB4P48594 390 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 PXNP49023 591 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 MRE11P49959 708 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 DGKEP52429 567 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 WDR4P57081 412 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ATP11AP98196 1134 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF252P-AS1Q0IIN9 211 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 SRSF5Q13243 272 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 MAMLD1Q13495 774 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF234Q14588 700 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ASTE1Q2TB18 679 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TDRD12Q587J7 1177 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 HEATR6Q6AI08 1181 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 CXorf57Q6NSI4 855 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 KIAA1211LQ6NV74 962 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 DNAJC24Q6P3W2 148 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 CHST9Q7L1S5 443 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 MFN1Q8IWA4 741 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 DRC7Q8IY82 874 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 AHI1Q8N157 1196 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 CCAR2Q8N163 923 aaKnown RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ZNF557Q8N988 423 aaPredicted RBP9.04□□□□□ -0.96
ITGB1-217ENST00000494395 SORCS1Q8WY21 1168 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 RNF34Q969K3 372 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 TTC17Q96AE7 1141 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 ALG14Q96F25 216 aa9.04□□□□□ -0.96
ITGB1-217ENST00000494395 MYO19Q96H55 970 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms