RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 HOOK1Q9UJC3 728 aaKnown RBP8.54□□□□□ -1.04
RIF1-211ENST00000494333 ARHGAP26Q9UNA1 814 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 MSRB2Q9Y3D2 182 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 PCDHGA2Q9Y5H1 932 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 WNT6Q9Y6F9 365 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 TCHHQ07283 1943 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 ATP8B3O60423 1300 aa8.54□□□□□ -1.04
RIF1-211ENST00000494333 LEFTY2O00292 366 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 TRDMT1O14717 391 aaKnown RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 BEST1O76090 585 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 EPB41P11171 864 aaKnown RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 PFKLP17858 780 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 TRIM21P19474 475 aaKnown RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 ADORA2BP29275 332 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 GJA4P35212 333 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 GDNFP39905 211 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 IFNAR2P48551 515 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SLC5A3P53794 718 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 MAP3K7CLP57077 242 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 POU4F1Q01851 419 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 ENPEPQ07075 957 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 TCERG1LQ5VWI1 586 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 ANKRD40Q6AI12 368 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SYNPOQ8N3V7 929 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 DCLK2Q8N568 766 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SUMF1Q8NBK3 374 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SLC2A14Q8TDB8 520 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 UBXN4Q92575 508 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 FBXO32Q969P5 355 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 CHFRQ96EP1 664 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SMARCD1Q96GM5 515 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 CCDC120Q96HB5 630 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 TSG101Q99816 390 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SMOQ99835 787 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 P2RY13Q9BPV8 354 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 G6PC3Q9BUM1 346 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 CDADC1Q9BWV3 514 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 FAM126AQ9BYI3 521 aaPredicted RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 CYP3A43Q9HB55 503 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 APOBEC3GQ9HC16 384 aaKnown RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 FAM49BQ9NUQ9 324 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 SMPD4Q9NXE4 827 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 CPQQ9Y646 472 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 F5P12259 2224 aa8.53□□□□□ -1.04
RIF1-211ENST00000494333 ZFHX2Q9C0A1 2572 aaPredicted RBP8.53□□□□□ -1.04
RIF1-211ENST00000494333 CACNA1IQ9P0X4 2223 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 STX10O60499 249 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 OAS1P00973 400 aaKnown RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 EGFP01133 1207 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 ITGAVP06756 1048 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 CD3EP07766 207 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 GSTM1P09488 218 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 MBL2P11226 248 aaPredicted RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 TDGF1P13385 188 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 CD58P19256 250 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 GTF2H1P32780 548 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 NOP2P46087 812 aaKnown RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 IRAK1P51617 712 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 SLC7A9P82251 487 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 FKBP3Q00688 224 aaKnown RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 INCA1Q0VD86 236 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 COBLL1Q53SF7 1204 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 HECTD3Q5T447 861 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 NAIF1Q69YI7 327 aaPredicted RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 FSTL4Q6MZW2 842 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 KIAA2013Q8IYS2 634 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 ADGRG2Q8IZP9 1017 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 FBXL13Q8NEE6 735 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 PDZD8Q8NEN9 1154 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 ZMIZ2Q8NF64 920 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 SPATA20Q8TB22 786 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 OVCA2Q8WZ82 227 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 RUBCNQ92622 972 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 SEMA4DQ92854 862 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 ATP2A3Q93084 1043 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 EXOC4Q96A65 974 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 CYFIP2Q96F07 1278 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 FCRL3Q96P31 734 aaPredicted RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 TWNKQ96RR1 684 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 HNRNPABQ99729 332 aaKnown RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 MCMBPQ9BTE3 642 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 GTPBP4Q9BZE4 634 aaKnown RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 EPN3Q9H201 632 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 CSNK1G1Q9HCP0 422 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 C2orf42Q9NWW7 574 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 COMMD8Q9NX08 183 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 RAB20Q9NX57 234 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 IL37Q9NZH6 218 aa8.52□□□□□ -1.05
RIF1-211ENST00000494333 PTPRZ1P23471 2315 aaPredicted RBP8.52□□□□□ -1.05
RIF1-211ENST00000494333 FAM92AA1XBS5 289 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 K7ESF4 209 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 SLC9A3R1O14745 358 aaPredicted RBP8.51□□□□□ -1.05
RIF1-211ENST00000494333 COCHO43405 550 aa8.51□□□□□ -1.05
RIF1-211ENST00000494333 ATG13O75143 517 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms