RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 A0A1W2PP55 124 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 FAM47DPA6NHR8 397 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 GOLGA8SH3BPF8 625 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 PLK4O00444 970 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 KCNK3O14649 394 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 MID1O15344 667 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 PAGE1O75459 146 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 GJB3O75712 270 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 GJB6O95452 261 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 DNTTP04053 509 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 ASLP04424 464 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 CHRNB2P17787 502 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 CSRP1P21291 193 aaKnown RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 FLT3P36888 993 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 DPP6P42658 865 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 MATKP42679 507 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 GABRB2P47870 512 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 SULT1E1P49888 294 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 BPIFB4P59827 614 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 POLR2FP61218 127 aaKnown RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 ST8SIA6P61647 398 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 NOMO3P69849 1222 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 FOXC1Q12948 553 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 E2F5Q15329 346 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 ALFQ53S48 1182 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 CT47A1Q5JQC4 288 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 FAM102AQ5T9C2 384 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 ZNF776Q68DI1 518 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 ERICH1Q86X53 443 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 MMAAQ8IVH4 418 aaKnown RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 CCDC117Q8IWD4 279 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 ZNF683Q8IZ20 524 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 STK40Q8N2I9 435 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 GANCQ8TET4 914 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 SNX19Q92543 992 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 PTPRN2Q92932 1015 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 BIRC7Q96CA5 298 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 C18orf8Q96DM3 657 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 RPRD1AQ96P16 312 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 ORAI3Q9BRQ5 295 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 TKTL2Q9H0I9 626 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 NEUROG2Q9H2A3 272 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 PABPC3Q9H361 631 aaKnown RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.8□□□□□ -1
LRCH3-219ENST00000494069 NOCTQ9UK39 431 aaKnown RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 SIK3Q9Y2K2 1263 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.8□□□□□ -1
LRCH3-219ENST00000494069 CEP83Q9Y592 693 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 OR51B4Q9Y5P0 310 aa8.8□□□□□ -1
LRCH3-219ENST00000494069 ACACBO00763 2458 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 FRYQ5TBA9 3013 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SPEGQ15772 3267 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 A0A1B0GVM2 712 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 A0A1B0GVT2 93 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 TCAF2A6NFQ2 919 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 PCNX2A6NKB5 2137 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 BCAT2O15382 392 aaPredicted RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 SH3BP5O60239 455 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 OPHN1O60890 802 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 FSBPO95073 299 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 MOCS3O95396 460 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SEMA4FO95754 770 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SRPRAP08240 638 aaKnown RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 SYPP08247 313 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SLC2A3P11169 496 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 CEACAM1P13688 526 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 GNSP15586 552 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SLC8A1P32418 973 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 PSMD8P48556 350 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 CSNK1EP49674 416 aaKnown RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 CXCR3P49682 368 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 PLK1P53350 603 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 COPB1P53618 953 aaKnown RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 JAM2P57087 298 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 FMO1Q01740 532 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 ZBTB16Q05516 673 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 DEUP1Q05D60 604 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 CAMK2BQ13554 666 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 ARID5BQ14865 1188 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 NCAPHQ15003 741 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 SYCP1Q15431 976 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 CST6Q15828 149 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 KCNT1Q5JUK3 1230 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 RABGAP1LQ5R372 815 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 RNF219Q5W0B1 726 aaPredicted RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 SASS6Q6UVJ0 657 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 ZDHHC17Q8IUH5 632 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 HDDC3Q8N4P3 179 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 AADATQ8N5Z0 425 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 EMC1Q8N766 993 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 ZNF557Q8N988 423 aaPredicted RBP8.79□□□□□ -1
LRCH3-219ENST00000494069 SLC30A5Q8TAD4 765 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 FRS2Q8WU20 508 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 NT5C3BQ969T7 300 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 CFAP57Q96MR6 1250 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 GBP4Q96PP9 640 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 PCDHB18PQ96TA0 734 aa8.79□□□□□ -1
LRCH3-219ENST00000494069 FEM1AQ9BSK4 669 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms