RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 CCDC170Q8IYT3 715 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 THEM5Q8N1Q8 247 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 WDTC1Q8N5D0 677 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 DEFB123Q8N688 67 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 ACRBPQ8NEB7 543 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 OR10T2Q8NGX3 314 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 UBA3Q8TBC4 463 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 SPATA18Q8TC71 538 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 TRIM44Q96DX7 344 aaPredicted RBP6.91□□□□□ -1.3
TRA2B-216ENST00000493864 CYFIP2Q96F07 1278 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 EIF3CQ99613 913 aaKnown RBP6.91□□□□□ -1.3
TRA2B-216ENST00000493864 SYT15Q9BQS2 421 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 ACBD6Q9BR61 282 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 C17orf80Q9BSJ5 609 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 DESI2Q9BSY9 194 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 TTPALQ9BTX7 342 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 B3GNT5Q9BYG0 378 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 PDCL3Q9H2J4 239 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 FAM49BQ9NUQ9 324 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 SEPT11Q9NVA2 429 aaKnown RBP6.91□□□□□ -1.3
TRA2B-216ENST00000493864 TMLHEQ9NVH6 421 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 FAM53CQ9NYF3 392 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 TAS2R14Q9NYV8 317 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 GTF3C4Q9UKN8 822 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 DSEQ9UL01 958 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 CDH9Q9ULB4 789 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 REXO2Q9Y3B8 237 aaKnown RBP6.91□□□□□ -1.3
TRA2B-216ENST00000493864 SIT1Q9Y3P8 196 aa6.91□□□□□ -1.3
TRA2B-216ENST00000493864 SF3B1O75533 1304 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRA2B-216ENST00000493864 CUL9Q8IWT3 2517 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 VWA8A3KMH1 1905 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 A0A0U1RQJ8 604 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 O00370 1275 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CLDN5O00501 218 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ADAM12O43184 909 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 TBC1D4O60343 1298 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 RFPL3O75679 317 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 FGF18O76093 207 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 LCA5LO95447 670 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CA3P07451 260 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 OR4Q2P0C623 313 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CCDC130P13994 396 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 RPL17P18621 184 aaKnown RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ANXA13P27216 316 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PCSK1P29120 753 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ADORA2BP29275 332 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CTNNB1P35222 781 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 MAGEA1P43355 309 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 KRT17Q04695 432 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 YWHAHQ04917 246 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ELAVL2Q12926 359 aaKnown RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 GOLGA7BQ2TAP0 167 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 USP41Q3LFD5 358 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CTXN3Q4LDR2 81 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ARHGAP17Q68EM7 881 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ACAD10Q6JQN1 1059 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ALKBH5Q6P6C2 394 aaKnown RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 FAM171BQ6P995 826 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 LCLAT1Q6UWP7 414 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PAQR9Q6ZVX9 377 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 DDX53Q86TM3 631 aaKnown RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 VPS36Q86VN1 386 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ZNF677Q86XU0 584 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 FUKQ8N0W3 1084 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 VPS52Q8N1B4 723 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 C17orf53Q8N3J3 647 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 NETO2Q8NC67 525 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 B3GALNT2Q8NCR0 500 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PCDH19Q8TAB3 1148 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 MYCBPAPQ8TBZ2 947 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 SLC2A14Q8TDB8 520 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CPA5Q8WXQ8 436 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 AUTS2Q8WXX7 1259 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 RIN2Q8WYP3 895 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 TNIP3Q96KP6 325 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PKMYT1Q99640 499 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 MED10Q9BTT4 135 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PACSIN1Q9BY11 444 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 TTYH1Q9H313 450 aaPredicted RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 EPB41L1Q9H4G0 881 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 KCNK12Q9HB15 430 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 ALG13Q9NP73 1137 aaKnown RBP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 KLHL14Q9P2G3 628 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 CYTH4Q9UIA0 394 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 NUDT5Q9UKK9 219 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 MTUS1Q9ULD2 1270 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 NENFQ9UMX5 172 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRA2B-216ENST00000493864 TFR2Q9UP52 801 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 PCDHA13Q9Y5I0 950 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 HCFC2Q9Y5Z7 792 aa6.9□□□□□ -1.3
TRA2B-216ENST00000493864 TCRBV16S1A1N1A0A5B0 115 aa6.89□□□□□ -1.31
TRA2B-216ENST00000493864 OR6C75A6NL08 312 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms