RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 NLRP14Q86W24 1093 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 TMEM25Q86YD3 366 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 SUGP1Q8IWZ8 645 aaKnown RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 UMODL1-AS1Q8N2C9 162 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 OSBPL9Q96SU4 736 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 EBF3Q9H4W6 596 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 EPHX3Q9H6B9 360 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 C8orf33Q9H7E9 229 aaPredicted RBP12.78□□□□□ -0.36
SNX17-208ENST00000493711 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 HOMER3Q9NSC5 361 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 SNX10Q9Y5X0 201 aa12.78□□□□□ -0.36
SNX17-208ENST00000493711 ILVBLA1L0T0 632 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 NEDD8-MDP1E9PL57 170 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 DCLK1O15075 740 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 CEP104O60308 925 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 CACNG3O60359 315 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 CD48P09326 243 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 TYRP14679 529 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 ARSAP15289 507 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 MX2P20592 715 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 HOXD9P28356 352 aaPredicted RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 OR1E1P30953 314 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 DMC1Q14565 340 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 PAFAH1B3Q15102 231 aaKnown RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 PARP15Q460N3 678 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 TMEM31Q5JXX7 168 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 SLC9A4Q6AI14 798 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 RASGEF1CQ8N431 466 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 ACTRT1Q8TDG2 376 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 RSAD2Q8WXG1 361 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 ASIC4Q96FT7 647 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 BRD8Q9H0E9 1235 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 MAGEH1Q9H213 219 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 HPS4Q9NQG7 708 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 MPP6Q9NZW5 540 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 KIAA1522Q9P206 1035 aaPredicted RBP12.77□□□□□ -0.37
SNX17-208ENST00000493711 SORCS3Q9UPU3 1222 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 NEU3Q9UQ49 428 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 NOTCH4Q99466 2003 aa12.77□□□□□ -0.37
SNX17-208ENST00000493711 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
SNX17-208ENST00000493711 PIEZO1Q92508 2521 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 CXorf51AA0A1B0GTR3 108 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 ARHGAP42A6NI28 874 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 APOC4-APOC2K7ER74 178 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 PGRMC1O00264 195 aaKnown RBP12.76□□□□□ -0.37
SNX17-208ENST00000493711 ARNTLO00327 626 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 CST8O60676 142 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 RAMP2O60895 175 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 CNTN5O94779 1100 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 APOC2P02655 101 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 RHOCP08134 193 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 AMPD1P23109 780 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 GGCXP38435 758 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 PAFAH1B1P43034 410 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 ZNF211Q13398 564 aaPredicted RBP12.76□□□□□ -0.37
SNX17-208ENST00000493711 ALFQ53S48 1182 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 TRIM68Q6AZZ1 485 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 RALGPS2Q86X27 583 aaPredicted RBP12.76□□□□□ -0.37
SNX17-208ENST00000493711 SLC13A5Q86YT5 568 aaPredicted RBP12.76□□□□□ -0.37
SNX17-208ENST00000493711 UBALD2Q8IYN6 164 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 CFAP52Q8N1V2 620 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 PQLC3Q8N755 202 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 WFIKKN2Q8TEU8 576 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 P3H4Q92791 437 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 ZFYVE19Q96K21 471 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 MAGEB5Q9BZ81 275 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 DEC1Q9P2X7 70 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 FBXO10Q9UK96 956 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 SLC27A6Q9Y2P4 619 aa12.76□□□□□ -0.37
SNX17-208ENST00000493711 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 TIMM44O43615 452 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 FGGP02679 453 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 ASGR2P07307 311 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 KRT10P13645 584 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 DGKGP49619 791 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 PLK1P53350 603 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 GNA12Q03113 381 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 POLD3Q15054 466 aaPredicted RBP12.75□□□□□ -0.37
SNX17-208ENST00000493711 PDK1Q15118 436 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 LONRF2Q1L5Z9 754 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 TMCO4Q5TGY1 634 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 KAZNQ674X7 775 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 GRAMD4Q6IC98 578 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 DENND4AQ7Z401 1863 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms