RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 C4orf47A7E2U8 309 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 SIN3BO75182 1162 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 GNSP15586 552 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 KCNA4P22459 653 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 MZF1P28698 734 aaPredicted RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 PLK1P53350 603 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 GSCP56915 257 aaPredicted RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 IRX4P78413 519 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 ATP11AP98196 1134 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 GFPT1Q06210 699 aaPredicted RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 SFSWAPQ12872 951 aaKnown RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 ARID5BQ14865 1188 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 CDO1Q16878 200 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 C5orf22Q49AR2 442 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 DAB2IPQ5VWQ8 1189 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 LRSAM1Q6UWE0 723 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 C14orf80Q86SX3 495 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 FAM131BQ86XD5 332 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 PHF13Q86YI8 300 aaPredicted RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 AGPAT1Q99943 283 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 SELENOOQ9BVL4 669 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 MUC3BQ9H195 1237 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 RSPH9Q9H1X1 276 aaPredicted RBP15.53■□□□□ 0.08
USP39-217ENST00000491659 MTG2Q9H4K7 406 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 VPS28Q9UK41 221 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 MYO6Q9UM54 1294 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 SCML1Q9UN30 329 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 SLC6A14Q9UN76 642 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 PCDH15Q96QU1 1955 aa15.53■□□□□ 0.08
USP39-217ENST00000491659 MED19A0JLT2 244 aaPredicted RBP15.52■□□□□ 0.08
USP39-217ENST00000491659 TTC34A8MYJ7 566 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 SERPINC1P01008 464 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 RHOCP08134 193 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 SERPINF2P08697 491 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 C7P10643 843 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 KRT3P12035 628 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 ENGP17813 658 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 NUMBP49757 651 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 STK19P49842 368 aaPredicted RBP15.52■□□□□ 0.08
USP39-217ENST00000491659 ATXN3P54252 364 aaPredicted RBP15.52■□□□□ 0.08
USP39-217ENST00000491659 ARL13BQ3SXY8 428 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 PPM1JQ5JR12 505 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 DCAF12L1Q5VU92 463 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 BNIPLQ7Z465 357 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 C3orf20Q8ND61 904 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 JOSD2Q8TAC2 188 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 RXFP2Q8WXD0 754 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 RPL10LQ96L21 214 aaKnown RBP15.52■□□□□ 0.08
USP39-217ENST00000491659 C1orf74Q96LT6 269 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 HAPLN3Q96S86 360 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 PCED1AQ9H1Q7 454 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 ANLNQ9NQW6 1124 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 NCKAP1Q9Y2A7 1128 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 TBC1D30Q9Y2I9 924 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 SNX10Q9Y5X0 201 aa15.52■□□□□ 0.08
USP39-217ENST00000491659 A0A1B0GTH6 734 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 A0A1W2PQC6 194 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 ANKRD62A6NC57 917 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 E9PAM4 449 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 I6L893 689 aaPredicted RBP15.51■□□□□ 0.07
USP39-217ENST00000491659 ENDOD1O94919 500 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 PTPN9P43378 593 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 MAPK8P45983 427 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 C1QBPQ07021 282 aaKnown RBP15.51■□□□□ 0.07
USP39-217ENST00000491659 PTP4A2Q12974 167 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 IQCB1Q15051 598 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 CST6Q15828 149 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 ASIC2Q16515 512 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 C15orf59Q2T9L4 293 aaPredicted RBP15.51■□□□□ 0.07
USP39-217ENST00000491659 ALFQ53S48 1182 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 C6orf118Q5T5N4 469 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 C9orf64Q5T6V5 341 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 PPP1R2P3Q6NXS1 205 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 DNAJC24Q6P3W2 148 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 USP30Q70CQ3 517 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 MON1BQ7L1V2 547 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 SETD3Q86TU7 594 aaPredicted RBP15.51■□□□□ 0.07
USP39-217ENST00000491659 ZNF683Q8IZ20 524 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 GANCQ8TET4 914 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 SNX19Q92543 992 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 FEM1AQ9BSK4 669 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 BTBD1Q9H0C5 482 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 PABPC3Q9H361 631 aaKnown RBP15.51■□□□□ 0.07
USP39-217ENST00000491659 CAPN10Q9HC96 672 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 TMPRSS4Q9NRS4 437 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 SLCO3A1Q9UIG8 710 aa15.51■□□□□ 0.07
USP39-217ENST00000491659 DNAH14Q0VDD8 3507 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 IGLV3-10A0A075B6K4 115 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 C2CD4BA6NLJ0 364 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 LRRC53A6NM62 1247 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 DRGXA6NNA5 263 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 METTL12A8MUP2 240 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 SRGAP2O75044 1071 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 CNTN5O94779 1100 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 GJB6O95452 261 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 SEMA4FO95754 770 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 SYPP08247 313 aa15.5■□□□□ 0.07
USP39-217ENST00000491659 GPD1P21695 349 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms