RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	GTSE1	Q9NYZ3	720 aa		13.9	□□□□□ -0.18
NUP188-208	ENST00000491502	DNMT3L	Q9UJW3	386 aa		13.9	□□□□□ -0.18
NUP188-208	ENST00000491502	NDRG2	Q9UN36	371 aa	Known RBP	13.9	□□□□□ -0.18
NUP188-208	ENST00000491502	ZNF148	Q9UQR1	794 aa		13.9	□□□□□ -0.18
NUP188-208	ENST00000491502	CACNA1H	O95180	2353 aa		13.9	□□□□□ -0.18
NUP188-208	ENST00000491502	TCRBV7S2A1N4T	A0A589	114 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	SLC9A3R1	O14745	358 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	LIAS	O43766	372 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	TLR5	O60602	858 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ITGAV	P06756	1048 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	STIP1	P31948	543 aa	Known RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	CTH	P32929	405 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	SERPINB6	P35237	376 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ACTN2	P35609	894 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ATXN1	P54253	815 aa	Known RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	DRG2	P55039	364 aa	Known RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	TPI1	P60174	286 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	DYNLT1	P63172	113 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	COG7	P83436	770 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	RING1	Q06587	406 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	EFEMP1	Q12805	493 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	FZD5	Q13467	585 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	LRRC32	Q14392	662 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	LLGL1	Q15334	1064 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	DGKK	Q5KSL6	1271 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	OTUD1	Q5VV17	481 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	SLC9A4	Q6AI14	798 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	TMCO3	Q6UWJ1	677 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	LRRC31	Q6UY01	552 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	MAMSTR	Q6ZN01	415 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	JAML	Q86YT9	394 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ZNF687	Q8N1G0	1237 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	CPA6	Q8N4T0	437 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ANKRD7	Q92527	254 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ATP2A3	Q93084	1043 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	C1orf74	Q96LT6	269 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	CSPG4P5	Q96PW8	444 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	KCTD15	Q96SI1	283 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ERP44	Q9BS26	406 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	RNF38	Q9H0F5	515 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	CATSPERB	Q9H7T0	1116 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	LMAN1L	Q9HAT1	526 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	EPB41L5	Q9HCM4	733 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	ARFGAP3	Q9NP61	516 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	GPATCH2L	Q9NWQ4	482 aa		13.89	□□□□□ -0.19
NUP188-208	ENST00000491502	COL4A2	P08572	1712 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	LEFTY2	O00292	366 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	FGF10	O15520	208 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	TTI1	O43156	1089 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	LAMTOR5	O43504	91 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CREB3	O43889	395 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CD48	P09326	243 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	MBL2	P11226	248 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	PITX1	P78337	314 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	NRG1	Q02297	640 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	TNK2	Q07912	1038 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CALCOCO2	Q13137	446 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	XRCC4	Q13426	336 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	SNX1	Q13596	522 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	NAA30	Q147X3	362 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CA9	Q16790	459 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	RAB6C	Q53S08	254 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	C4orf22	Q6V702	233 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	RFX8	Q6ZV50	586 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	SYNPO	Q8N3V7	929 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	PLD5	Q8N7P1	536 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	TTC8	Q8TAM2	541 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	ACTL9	Q8TC94	416 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	BTN2A3P	Q96KV6	586 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	DDX50	Q9BQ39	737 aa	Known RBP	13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	BRD8	Q9H0E9	1235 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	RAB6C	Q9H0N0	254 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	TSPYL1	Q9H0U9	437 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	EBF3	Q9H4W6	596 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	RETREG1	Q9H6L5	497 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	HPS4	Q9NQG7	708 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	GDF3	Q9NR23	364 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	OR12D3	Q9UGF7	316 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	SFMBT1	Q9UHJ3	866 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	FBXO4	Q9UKT5	387 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	CPQ	Q9Y646	472 aa		13.88	□□□□□ -0.19
NUP188-208	ENST00000491502	WDFY4	Q6ZS81	3184 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	SLC12A8	A0AV02	714 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	HACD1	B0YJ81	288 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	STK10	O94804	968 aa	Known RBP	13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	NFATC1	O95644	943 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	CHRNB1	P11230	501 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	MX2	P20592	715 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	IL4R	P24394	825 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	NBL1	P41271	181 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	SOX9	P48436	509 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	HARS2	P49590	506 aa	Known RBP	13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	EIF3E	P60228	445 aa	Known RBP	13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	SLC7A5	Q01650	507 aa		13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	OTUD4	Q01804	1114 aa	Known RBP	13.87	□□□□□ -0.19
NUP188-208	ENST00000491502	CAV1	Q03135	178 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms