RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 VPS37BQ9H9H4 285 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SHOC2Q9UQ13 582 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 PLXNA4Q9HCM2 1894 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 CFAP69A5D8W1 941 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 C5orf60A6NFR6 353 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 J3KR12 359 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 GLUD1P00367 558 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 OAS1P00973 400 aaKnown RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 HDCP19113 662 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 TACR2P21452 398 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 CD68P34810 354 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SERPINB6P35237 376 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 CCDC38Q502W7 563 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 PHOSPHO2Q8TCD6 241 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SERPINB12Q96P63 405 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 SH3GL2Q99962 352 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 ZYG11BQ9C0D3 744 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 CATSPERBQ9H7T0 1116 aa14.28□□□□□ -0.12
SMPD4-219ENST00000491128 ZFP37Q9Y6Q3 630 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-219ENST00000491128 PRRC2BQ5JSZ5 2229 aaKnown RBP14.27□□□□□ -0.12
SMPD4-219ENST00000491128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 A0A0D9SEW6 157 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 RFXAPO00287 272 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 HPDP32754 393 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 ELK3P41970 407 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 HARS2P49590 506 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 SMAD3P84022 425 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PPIDQ08752 370 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.131e-6■■■■□ 25.3
SMPD4-219ENST00000491128 PDZD4Q76G19 769 aaPredicted RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 CAND1Q86VP6 1230 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 NLRP14Q86W24 1093 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 CNTD1Q8N815 330 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 SPATA22Q8NHS9 363 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 C1orf74Q96LT6 269 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PRMT1Q99873 361 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 GORASP1Q9BQQ3 440 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 AGO1Q9UL18 857 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 CPQQ9Y646 472 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PLXNA3P51805 1871 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 BPTFQ12830 3046 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 MAFKO60675 156 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 GJB3O75712 270 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 OR1E1P30953 314 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 ACVRL1P37023 503 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 ATP1A2P50993 1020 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 CLCN4P51793 760 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 GPX6P59796 221 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 CENPUQ71F23 418 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 ADGRD2Q7Z7M1 963 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PCGF5Q86SE9 256 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.13
SMPD4-219ENST00000491128 MAN1C1Q9NR34 630 aa14.27□□□□□ -0.13
SMPD4-219ENST00000491128 HACD1B0YJ81 288 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ACSL4O60488 711 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CKMP06732 381 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 MYZAPP0CAP1 466 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 NFKB1P19838 968 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 HOXC13P31276 330 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ETFBP38117 255 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ARL4CP56559 192 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 MAXP61244 160 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 IFI35P80217 286 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ZNF534Q76KX8 674 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 C12orf76Q8N812 135 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 PYROXD1Q8WU10 500 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ARNTL2Q8WYA1 636 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ZFRQ96KR1 1074 aaKnown RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 EMILIN2Q9BXX0 1053 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 COMMD8Q9NX08 183 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 PLK2Q9NYY3 685 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CLUHO75153 1309 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 MT-CYBP00156 380 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 SESN2P58004 480 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 PPM1LQ5SGD2 360 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 SNX30Q5VWJ9 437 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 NUGGCQ68CJ6 796 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 TRMT10CQ7L0Y3 403 aaKnown RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 TMC8Q8IU68 726 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 PDIK1LQ8N165 341 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 ZSCAN18Q8TBC5 510 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 HDAC11Q96DB2 347 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CFAP36Q96G28 342 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 KLF16Q9BXK1 252 aaPredicted RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 MED4Q9NPJ6 270 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 HSFX1Q9UBD0 423 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 NOVA2Q9UNW9 492 aaKnown RBP14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CCL26Q9Y258 94 aa14.26□□□□□ -0.13
SMPD4-219ENST00000491128 CCDC78A2IDD5 438 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 GOLGA6CA6NDK9 693 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms