RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 WSB2Q9NYS7 404 aaPredicted RBP18.66■□□□□ 0.58
COL9A3-214ENST00000490398 ZNF212Q9UDV6 495 aa18.66■□□□□ 0.58
COL9A3-214ENST00000490398 TBC1D30Q9Y2I9 924 aa18.66■□□□□ 0.58
COL9A3-214ENST00000490398 THADAQ6YHU6 1953 aa18.66■□□□□ 0.58
COL9A3-214ENST00000490398 PLXND1Q9Y4D7 1925 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 IGLV3-10A0A075B6K4 115 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-214ENST00000490398 SIGLEC16A6NMB1 481 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FAM72CH0Y354 149 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 GOLGA6L19H0YKK7 550 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 CCP110O43303 1012 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 CLDN11O75508 207 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 GPD1P21695 349 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 ADRA1BP35368 520 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 PRKCIP41743 596 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 PTPN9P43378 593 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 CDH4P55283 916 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 ZNF177Q13360 481 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-214ENST00000490398 HNRNPA1L2Q32P51 320 aaKnown RBP18.65■□□□□ 0.58
COL9A3-214ENST00000490398 C9orf64Q5T6V5 341 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FAM72AQ5TYM5 149 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 RNF219Q5W0B1 726 aaPredicted RBP18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FAM72DQ6L9T8 149 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 DNAJC24Q6P3W2 148 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 TFAP2DQ7Z6R9 452 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FAM124AQ86V42 546 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FAM72BQ86X60 149 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 MCEEQ96PE7 176 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 HAPLN3Q96S86 360 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 PSMB7Q99436 277 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 FSCN3Q9NQT6 498 aa18.65■□□□□ 0.58
COL9A3-214ENST00000490398 A0A0D9SEW6 157 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 SNAP91O60641 907 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 MOCS3O95396 460 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 SRPRAP08240 638 aaKnown RBP18.64■□□□□ 0.57
COL9A3-214ENST00000490398 CCDC172P0C7W6 258 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 C7P10643 843 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 CD6P30203 668 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 ST8SIA6P61647 398 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 TPM4P67936 248 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 ZNF33AQ06730 810 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 SLC12A1Q13621 1099 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 E2F5Q15329 346 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 FIGNQ5HY92 759 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 LYSMD4Q5XG99 296 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 HGSNATQ68CP4 663 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 SLC36A4Q6YBV0 504 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 STRADAQ7RTN6 431 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 CPLX3Q8WVH0 158 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 HSPA12BQ96MM6 686 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 GPR174Q9BXC1 333 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 TRIM7Q9C029 511 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 SUN2Q9UH99 717 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 PILRBQ9UKJ0 227 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 NEU3Q9UQ49 428 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 ITIH6Q6UXX5 1313 aa18.64■□□□□ 0.57
COL9A3-214ENST00000490398 PRR5-ARHGAP8B1AHC4 643 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 AP5Z1O43299 807 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 IGLV3-19P01714 112 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 RHOCP08134 193 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 GLDCP23378 1020 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 MAOBP27338 520 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 ARHGAP8P85298 464 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 KLHL30Q0D2K2 578 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 MTA1Q13330 715 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 NFKBIBQ15653 356 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 AASDHQ4L235 1098 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 MANEALQ5VSG8 457 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 PYROXD2Q8N2H3 581 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 C12orf50Q8NA57 414 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 KDM1BQ8NB78 822 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 OR7D4Q8NG98 312 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 FRS2Q8WU20 508 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 PTPRN2Q92932 1015 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 ZNF419Q96HQ0 510 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 FAM129BQ96TA1 746 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 XPO4Q9C0E2 1151 aaKnown RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 RSPH9Q9H1X1 276 aaPredicted RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 NDFIP2Q9NV92 336 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 PAXBP1Q9Y5B6 917 aa18.63■□□□□ 0.57
COL9A3-214ENST00000490398 TNRC6BQ9UPQ9 1833 aaKnown RBP18.63■□□□□ 0.57
COL9A3-214ENST00000490398 LNP1A1A4G5 178 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 DCDC2BA2VCK2 349 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 MT-CO1P00395 513 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 GYPCP04921 128 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 PLEKP08567 350 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-214ENST00000490398 ACADMP11310 421 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 ACSL1P33121 698 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 ZNF143P52747 638 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-214ENST00000490398 METAP1P53582 386 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 IRX4P78413 519 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 MAMLD1Q13495 774 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 ARID5BQ14865 1188 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 SPDYCQ5MJ68 293 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 PEAR1Q5VY43 1037 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-214ENST00000490398 LRRC31Q6UY01 552 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 SYT12Q8IV01 421 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 STK40Q8N2I9 435 aa18.62■□□□□ 0.57
COL9A3-214ENST00000490398 RNF214Q8ND24 703 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms