RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FFAR2O15552 330 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 TIMM44O43615 452 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 RTN2O75298 545 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 STC2O76061 302 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 CENPBP07199 599 aaPredicted RBP7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 HLA-FP30511 346 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 SLC5A2P31639 672 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 DCTP40126 519 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 SCTRP47872 440 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 RBP5P82980 135 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 IL17AQ16552 155 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 HYIQ5T013 277 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 NAPEPLDQ6IQ20 393 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 FIGNL1Q6PIW4 674 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 RBM44Q6ZP01 1051 aaKnown RBP7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 PAQR9Q6ZVX9 377 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 C14orf80Q86SX3 495 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 VASH2Q86V25 355 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 IFI44Q8TCB0 444 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 ARRDC3Q96B67 414 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 REEP2Q9BRK0 252 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 MTMR12Q9C0I1 747 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 ABCG4Q9H172 646 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 NEUROG2Q9H2A3 272 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 MTG2Q9H4K7 406 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 NMUR1Q9HB89 426 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 USP29Q9HBJ7 922 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 TUBD1Q9UJT1 453 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 ODF2LQ9ULJ1 636 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 SCML1Q9UN30 329 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 SVILO95425 2214 aa7.44□□□□□ -1.22
PDLIM1-203ENST00000490391 CCDC187A0A096LP49 1063 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 A0A1W2PP55 124 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 MID1O15344 667 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 TACC1O75410 805 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 PIAS2O75928 621 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 AGFG2O95081 481 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 IL2RAP01589 272 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 KRT19P08727 400 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 PLA2G4BP0C869 781 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 LIPCP11150 499 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 ATP5C1P36542 298 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 GNL1P36915 607 aaPredicted RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 UQCRFS1P47985 274 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 ADPRHP54922 357 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 OXCT1P55809 520 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 EHHADHQ08426 723 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 PDE4CQ08493 712 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 GOLGA8FQ08AF8 430 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 GOLGA8DPQ0D2H9 430 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 OVGP1Q12889 678 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 KCNAB2Q13303 367 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 FNDC3BQ53EP0 1204 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 SLC45A4Q5BKX6 768 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 TTC38Q5R3I4 469 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 KRT79Q5XKE5 535 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 KLHDC10Q6PID8 442 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 RSRC2Q7L4I2 434 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 KIAA0907Q7Z7F0 614 aaPredicted RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 FAM35AQ86V20 835 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 ADIPOR2Q86V24 386 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 B3GALNT2Q8NCR0 500 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 ZMIZ2Q8NF64 920 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 SSC4DQ8WTU2 575 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 CACTINQ8WUQ7 758 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 MYO19Q96H55 970 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 HPDLQ96IR7 371 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 SLC2A11Q9BYW1 496 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 RAB6BQ9NRW1 208 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 COMMD8Q9NX08 183 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 NLGN3Q9NZ94 848 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 FZD4Q9ULV1 537 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 NCKAP1Q9Y2A7 1128 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 HRH3Q9Y5N1 445 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 CYP46A1Q9Y6A2 500 aa7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 NYNRINQ9P2P1 1898 aaKnown RBP7.43□□□□□ -1.22
PDLIM1-203ENST00000490391 SHANK1Q9Y566 2161 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 A1L4Q6 167 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 K7ESM1 405 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 MTSS1O43312 755 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 MAGEC1O60732 1142 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 SIN3BO75182 1162 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 TCEA3O75764 348 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 RNASEH2AO75792 299 aaKnown RBP7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 DLDP09622 509 aaKnown RBP7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 HOXD9P28356 352 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 CHKAP35790 457 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 POLE2P56282 527 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 ZNF177Q13360 481 aaPredicted RBP7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 CST6Q15828 149 aa7.42□□□□□ -1.22
PDLIM1-203ENST00000490391 GUSBP11Q6P575 273 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms