RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PDGFRAP16234 1089 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 SPINK2P20155 84 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 NOS2P35228 1153 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 PPP2CBP62714 309 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 PPP2CAP67775 309 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 CT47A1Q5JQC4 288 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 FAM124AQ86V42 546 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 DHX40Q8IX18 779 aaKnown RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 CEP76Q8TAP6 659 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 RPL10LQ96L21 214 aaKnown RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 TRIM62Q9BVG3 475 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 NUSAP1Q9BXS6 441 aaKnown RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 OSGEPQ9NPF4 335 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 EIF2B4Q9UI10 523 aaKnown RBP12.19□□□□□ -0.46
SRSF4-204ENST00000489898 SARDHQ9UL12 918 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 VANGL2Q9ULK5 521 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 APC2O95996 2303 aa12.19□□□□□ -0.46
SRSF4-204ENST00000489898 FAM208BQ5VWN6 2430 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SPAARA0A1B0GVQ0 90 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 MID1O15344 667 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SYNCRIPO60506 623 aaKnown RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 ENDOD1O94919 500 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 GJB6O95452 261 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SEMA4FO95754 770 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 CD160O95971 181 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 CTSLP07711 333 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SRPRAP08240 638 aaKnown RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 UNGP13051 313 aaPredicted RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 POLR2EP19388 210 aaKnown RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 MMP8P22894 467 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 CCR1P32246 355 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 ADPRHP54922 357 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 PTK2Q05397 1052 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 ZBTB16Q05516 673 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 CDH18Q13634 790 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 RAPGEF1Q13905 1077 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SHBQ15464 509 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 CST6Q15828 149 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 EFHC1Q5JVL4 640 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 E4F1Q66K89 784 aaPredicted RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 JOSD2Q8TAC2 188 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 GOLGA1Q92805 767 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 FUCA2Q9BTY2 467 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 STK33Q9BYT3 514 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 MAGEB5Q9BZ81 275 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 TM9SF3Q9HD45 589 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 FANCLQ9NW38 375 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SHROOM3Q8TF72 1996 aa12.18□□□□□ -0.46
SRSF4-204ENST00000489898 SYNJ2BP-COX16A0A087WUM0 186 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 A0A1W2PR77 199 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 LGALS16A8MUM7 142 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 F5H5T6 163 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 M0QYT0 321 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 CAPN9O14815 690 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 LATO43561 262 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ATP9BO43861 1147 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ZMPSTE24O75844 475 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 KRT37O76014 449 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 LSM8O95777 96 aaKnown RBP12.17□□□□□ -0.46
SRSF4-204ENST00000489898 MT-CO1P00395 513 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ATP5BP06576 529 aaKnown RBP12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ATP1A3P13637 1013 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 GLDCP23378 1020 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 OXTRP30559 389 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
SRSF4-204ENST00000489898 TAS2R38P59533 333 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ECT2LQ008S8 904 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 UAP1L1Q3KQV9 507 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 TTC39BQ5VTQ0 682 aaPredicted RBP12.17□□□□□ -0.46
SRSF4-204ENST00000489898 AGBL4Q5VU57 503 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 DAB2IPQ5VWQ8 1189 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ARCQ7LC44 396 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ZDHHC17Q8IUH5 632 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 STK40Q8N2I9 435 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 EMC1Q8N766 993 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ATP6V0D2Q8N8Y2 350 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ZNF557Q8N988 423 aaPredicted RBP12.17□□□□□ -0.46
SRSF4-204ENST00000489898 CFAP57Q96MR6 1250 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 FEM1AQ9BSK4 669 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 VPS16Q9H269 839 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 CAAP1Q9H8G2 361 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 NDFIP2Q9NV92 336 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 COX16Q9P0S2 106 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 ANGPTL2Q9UKU9 493 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 HS3ST2Q9Y278 367 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 BTBD3Q9Y2F9 522 aa12.17□□□□□ -0.46
SRSF4-204ENST00000489898 BSNQ9UPA5 3926 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms