RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CIR1Q86X95 450 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 TXLNBQ8N3L3 684 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ARFGAP1Q8N6T3 406 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 DCAF4L2Q8NA75 395 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 TSTD1Q8NFU3 115 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 ALG14Q96F25 216 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 BAG1Q99933 345 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 FEM1AQ9BSK4 669 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 C2orf49Q9BVC5 232 aaPredicted RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 PACSIN1Q9BY11 444 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 RAB6CQ9H0N0 254 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 TMEM245Q9H330 911 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 CATSPERBQ9H7T0 1116 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 CD248Q9HCU0 757 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 TMPRSS4Q9NRS4 437 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 INTS6Q9UL03 887 aaKnown RBP11.39□□□□□ -0.59
CPSF7-212ENST00000489728 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 OR51B4Q9Y5P0 310 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 STON1Q9Y6Q2 735 aa11.39□□□□□ -0.59
CPSF7-212ENST00000489728 A0A1W2PQF6 199 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 GOLGA6L3A6NEY3 463 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 PROB1E7EW31 1015 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 H0Y858 1186 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 ZBTB24O43167 697 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 CNTN5O94779 1100 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 OR1E1P30953 314 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 NNMTP40261 264 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 IRAK1P51617 712 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 KRT83P78385 493 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 DPYSL2Q16555 572 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 HADHQ16836 314 aaKnown RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 PTPRNQ16849 979 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 FNDC3BQ53EP0 1204 aaKnown RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 RNF219Q5W0B1 726 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 SERPINA13PQ6UXR4 307 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 C11orf74Q86VG3 221 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 RTL3Q8N8U3 475 aaKnown RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 SLC35G2Q8TBE7 412 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 ATRIPQ8WXE1 791 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 SNRNP25Q9BV90 132 aaKnown RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 GRPEL1Q9HAV7 217 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 CACNA2D2Q9NY47 1150 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 MPP6Q9NZW5 540 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 RCOR3Q9P2K3 495 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 VPS28Q9UK41 221 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-212ENST00000489728 CKAP5Q14008 2032 aa11.38□□□□□ -0.59
CPSF7-212ENST00000489728 BTNL10A8MVZ5 291 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 FAM72CH0Y354 149 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 AXIN1O15169 862 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SYNCRIPO60506 623 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 EPHB2P29323 1055 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 IL12RB1P42701 662 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SLC1A1P43005 524 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 MAGEA1P43355 309 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 CLCN6P51797 869 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 GEMIN4P57678 1058 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 YBEYP58557 167 aaPredicted RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 TPI1P60174 286 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 NHLH1Q02575 133 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 GNA12Q03113 381 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 CAMK2GQ13555 558 aaPredicted RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 BYSLQ13895 437 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 FAM72AQ5TYM5 149 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 FAM72DQ6L9T8 149 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 RWDD4Q6NW29 188 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 TFAP2DQ7Z6R9 452 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 METTL3Q86U44 580 aaKnown RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 FAM72BQ86X60 149 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 TMEM139Q8IV31 216 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 APCDD1Q8J025 514 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 CCDC112Q8NEF3 446 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 ATOH1Q92858 354 aaPredicted RBP11.37□□□□□ -0.59
CPSF7-212ENST00000489728 MRGPRX3Q96LB0 322 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 HHIPQ96QV1 700 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 PEBP4Q96S96 227 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 ACOX2Q99424 681 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 MUC3BQ9H195 1237 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 MAGEH1Q9H213 219 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SUN2Q9UH99 717 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SLC25A13Q9UJS0 675 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 ERVW-1Q9UQF0 538 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 HS3ST2Q9Y278 367 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 PCDHA13Q9Y5I0 950 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 SNX10Q9Y5X0 201 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 CHD5Q8TDI0 1954 aa11.37□□□□□ -0.59
CPSF7-212ENST00000489728 MYO18AQ92614 2054 aaKnown RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 TCRBV21S2A2A0A5A6 115 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 TARSL2A2RTX5 802 aaKnown RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 ZSCAN5CA6NGD5 496 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-212ENST00000489728 SOWAHDA6NJG2 315 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 ZNF487B1APH4 448 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 H3BRJ5 948 aa11.36□□□□□ -0.59
CPSF7-212ENST00000489728 EEF2KO00418 725 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms