RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 IL4RP24394 825 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PCSK1P29120 753 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TKTP29401 623 aaKnown RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CD52P31358 61 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 SDC4P31431 198 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 THPOP40225 353 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MLH1P40692 756 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MAGEA6P43360 314 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CDK7P50613 346 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PMS2P54278 862 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 AIF1P55008 147 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PLTPP55058 493 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 HDAC4P56524 1084 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DMTNQ08495 405 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DSC1Q08554 894 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TUSC3Q13454 348 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 TFDP2Q14188 446 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DPYSL3Q14195 570 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MORF4L2Q15014 288 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ARHGEF6Q15052 776 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 NOMO1Q15155 1222 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 RASA2Q15283 850 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PPP1R7Q15435 360 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DDR2Q16832 855 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FAM47CQ5HY64 1035 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 EFHC1Q5JVL4 640 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF618Q5T7W0 954 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 WSCD1Q658N2 575 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 SLC9A4Q6AI14 798 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 OR6B2Q6IFH4 312 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FAM171BQ6P995 826 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 KDM7AQ6ZMT4 941 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF574Q6ZN55 896 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CLEC20AQ6ZU45 233 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ZNF365Q70YC5 407 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PIGZQ86VD9 579 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 HOOK3Q86VS8 718 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ECHDC2Q86YB7 292 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CCDC50Q8IVM0 306 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MAP7D3Q8IWC1 876 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PHACTR4Q8IZ21 702 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ZCCHC9Q8N567 271 aaKnown RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 EMC1Q8N766 993 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DNAJB8Q8NHS0 232 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FAM76AQ8TAV0 307 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 BAHD1Q8TBE0 780 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MYCBPAPQ8TBZ2 947 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 SLC2A14Q8TDB8 520 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 NETO1Q8TDF5 533 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 RIN2Q8WYP3 895 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ARL8AQ96BM9 186 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PGAP3Q96FM1 320 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PGM2Q96G03 612 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 RNF157Q96PX1 679 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PEBP4Q96S96 227 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 SRPK1Q96SB4 655 aaKnown RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 RUFY1Q96T51 708 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 GAD1Q99259 594 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ACBD6Q9BR61 282 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 APOL6Q9BWW8 343 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 HEMGNQ9BXL5 484 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ROPN1BQ9BZX4 212 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ADAM7Q9H2U9 754 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ELAC1Q9H777 363 aaKnown RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 FAM204AQ9H8W3 233 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 ROPN1Q9HAT0 212 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PNPLA8Q9NP80 782 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CRTAC1Q9NQ79 661 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PRDM5Q9NQX1 630 aaPredicted RBP5.76□□□□□ -1.49
ATG4A-208ENST00000489247 MIOSQ9NXC5 875 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 GOLGA6AQ9NYA3 693 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 VPS18Q9P253 973 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DSEQ9UL01 958 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 DNPEPQ9ULA0 475 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 CDH9Q9ULB4 789 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 PCDHB10Q9UN67 800 aa5.76□□□□□ -1.49
ATG4A-208ENST00000489247 SF3B1O75533 1304 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATG4A-208ENST00000489247 MGAMO43451 1857 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 BCLAF3A2AJT9 711 aaKnown RBP5.75□□□□□ -1.49
ATG4A-208ENST00000489247 CFAP69A5D8W1 941 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 FAM221BA6H8Z2 402 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 HHLA1C9JL84 531 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 E7ESA3 106 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 PI4K2BG5E9Z4 385 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 POLR3GO15318 223 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-208ENST00000489247 EIF3HO15372 352 aaKnown RBP eCLIP5.75□□□□□ -1.49
ATG4A-208ENST00000489247 PRPSAP2O60256 369 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 TTC4O95801 387 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 CBX7O95931 251 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 KRT14P02533 472 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 PRNPP04156 253 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 MYZAPP0CAP1 466 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 GHRP10912 638 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 ODC1P11926 461 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 CKBP12277 381 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 KRT10P13645 584 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 CCDC130P13994 396 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 TSHRP16473 764 aa5.75□□□□□ -1.49
ATG4A-208ENST00000489247 ZFXP17010 805 aaPredicted RBP5.75□□□□□ -1.49
ATG4A-208ENST00000489247 STIP1P31948 543 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms