RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TTC39BQ5VTQ0 682 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-206ENST00000489142 SMYD5Q6GMV2 418 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 CAVIN1Q6NZI2 390 aaKnown RBP14.44□□□□□ -0.1
VTI1A-206ENST00000489142 APTXQ7Z2E3 356 aaKnown RBP14.44□□□□□ -0.1
VTI1A-206ENST00000489142 STK40Q8N2I9 435 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 MINDY1Q8N5J2 469 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 MSANTD4Q8NCY6 345 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 ANKRD20A12PQ8NF67 263 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 NEK11Q8NG66 645 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 PCDHB18PQ96TA0 734 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 C11orf70Q9BRQ4 267 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 RSPH9Q9H1X1 276 aaPredicted RBP14.44□□□□□ -0.1
VTI1A-206ENST00000489142 ARHGEF38Q9NXL2 777 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 TMEM59LQ9UK28 342 aa14.44□□□□□ -0.1
VTI1A-206ENST00000489142 CACNA1EQ15878 2313 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 A0A1W2PP55 124 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 FAM47DPA6NHR8 397 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 METTL12A8MUP2 240 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 ARHGAP33O14559 1287 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 FSBPO95073 299 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 SEMA4FO95754 770 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 SRPRAP08240 638 aaKnown RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 GNSP15586 552 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 STAT1P42224 750 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 ATP11AP98196 1134 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 GRIK2Q13002 908 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF177Q13360 481 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 CDO1Q16878 200 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 SLC25A52Q3SY17 297 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 TTC31Q49AM3 519 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 LAYNQ6UX15 382 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 SND1Q7KZF4 910 aaKnown RBP eCLIP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 RABEPKQ7Z6M1 372 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 TFAP2DQ7Z6R9 452 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 FAM131BQ86XD5 332 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 CADM4Q8NFZ8 388 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 NT5C3BQ969T7 300 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 CNTNAP3BQ96NU0 1288 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 CNTNAP3Q9BZ76 1288 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 BTBD1Q9H0C5 482 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 PABPC3Q9H361 631 aaKnown RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 FBRSQ9HAH7 460 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 SEPT11Q9NVA2 429 aaKnown RBP14.43□□□□□ -0.1
VTI1A-206ENST00000489142 RRN3Q9NYV6 651 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 MPP6Q9NZW5 540 aa14.43□□□□□ -0.1
VTI1A-206ENST00000489142 ITIH6Q6UXX5 1313 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 EDDM13A0A1B0GTR0 161 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 PLK4O00444 970 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 BCAT2O15382 392 aaPredicted RBP14.42□□□□□ -0.1
VTI1A-206ENST00000489142 CYP1A1P04798 512 aaPredicted RBP14.42□□□□□ -0.1
VTI1A-206ENST00000489142 SCNN1AP37088 669 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 METAP1P53582 386 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF252P-AS1Q0IIN9 211 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 CST6Q15828 149 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 C15orf59Q2T9L4 293 aaPredicted RBP14.42□□□□□ -0.1
VTI1A-206ENST00000489142 ACCSLQ4AC99 568 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 BRMS1LQ5PSV4 323 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF677Q86XU0 584 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 ZNF683Q8IZ20 524 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 JOSD2Q8TAC2 188 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 DNASE2BQ8WZ79 361 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 PTPRN2Q92932 1015 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 ALG14Q96F25 216 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 FEM1AQ9BSK4 669 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 MUC3BQ9H195 1237 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 FBXL12Q9NXK8 326 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 SUSD2Q9UGT4 822 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 VPS28Q9UK41 221 aa14.42□□□□□ -0.1
VTI1A-206ENST00000489142 A0A1B0GTW7 788 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 TEX33O43247 280 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 BNIP3LO60238 219 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SNAP91O60641 907 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 OPHN1O60890 802 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 RNASEH1O60930 286 aaKnown RBP14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SRGAP2O75044 1071 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 CLDN11O75508 207 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 RNASEH2AO75792 299 aaKnown RBP14.41□□□□□ -0.1
VTI1A-206ENST00000489142 RHOCP08134 193 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SYPP08247 313 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 MMP8P22894 467 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SLC8A1P32418 973 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 RDXP35241 583 aaKnown RBP14.41□□□□□ -0.1
VTI1A-206ENST00000489142 PLK1P53350 603 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 BNC1Q01954 994 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 ZBTB16Q05516 673 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 POM121L1PQ3SYA9 428 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 C5orf22Q49AR2 442 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 HDDC3Q8N4P3 179 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 AADATQ8N5Z0 425 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 RXFP2Q8WXD0 754 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 BIRC7Q96CA5 298 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 PGAP3Q96FM1 320 aaPredicted RBP14.41□□□□□ -0.1
VTI1A-206ENST00000489142 ERGIC2Q96RQ1 377 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 FAM129BQ96TA1 746 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 IL21RQ9HBE5 538 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SLC25A13Q9UJS0 675 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.41□□□□□ -0.1
VTI1A-206ENST00000489142 OR51B4Q9Y5P0 310 aa14.41□□□□□ -0.1
VTI1A-206ENST00000489142 SPAARA0A1B0GVQ0 90 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms