RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 WASF3Q9UPY6 502 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 SNX10Q9Y5X0 201 aa12.3□□□□□ -0.44
CCHCR1-215ENST00000488920 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 ACACBO00763 2458 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 A0A1W2PP55 124 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 I6L893 689 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 RNASEH2AO75792 299 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 CNTN5O94779 1100 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 GFPT2O94808 682 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 ZNF18P17022 549 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 NNMTP40261 264 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 PSMD8P48556 350 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 SULT1E1P49888 294 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 AFF3P51826 1226 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 GALCP54803 685 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 OXCT1P55809 520 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 POLR2FP61218 127 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 DEUP1Q05D60 604 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 HLA-BQ31612 363 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 FAM102AQ5T9C2 384 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 NAA35Q5VZE5 725 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 SND1Q7KZF4 910 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 NT5C3BQ969T7 300 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 ALG14Q96F25 216 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 TBCBQ99426 244 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 OMDQ99983 421 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 GANQ9H2C0 597 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 TM9SF3Q9HD45 589 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 FAM207AQ9NSI2 230 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 ARHGEF38Q9NXL2 777 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 STAP1Q9ULZ2 295 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 SCML1Q9UN30 329 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
CCHCR1-215ENST00000488920 KCNK3O14649 394 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 EPHB6O15197 1021 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 CLDN11O75508 207 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 LSM8O95777 96 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 F9P00740 461 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 IL1BP01584 269 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 IGHV4-34P06331 123 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 TPM2P07951 284 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 CD27P26842 260 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 SULT2A1Q06520 285 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 MTA1Q13330 715 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 TRIP6Q15654 476 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 ST3GAL2Q16842 350 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 KIF19Q2TAC6 998 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 SLC25A52Q3SY17 297 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 ACCSLQ4AC99 568 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 BRMS1LQ5PSV4 323 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 TRNP1Q6NT89 227 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 NCEH1Q6PIU2 408 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 SASS6Q6UVJ0 657 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 LAYNQ6UX15 382 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 RBM43Q6ZSC3 357 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 PHLDB2Q86SQ0 1253 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 NAXDQ8IW45 347 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 AADATQ8N5Z0 425 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 EPS8L1Q8TE68 723 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 FRS2Q8WU20 508 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 PPP1R9BQ96SB3 815 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 NLRC4Q9NPP4 1024 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 NOCTQ9UK39 431 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 VPS28Q9UK41 221 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 OR51B4Q9Y5P0 310 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
CCHCR1-215ENST00000488920 PCDH15Q96QU1 1955 aa12.27□□□□□ -0.44
CCHCR1-215ENST00000488920 PLK4O00444 970 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 HYAL3O43820 417 aaPredicted RBP12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 KRT37O76014 449 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 CER1O95813 267 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 GOT1P17174 413 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 CHRNB2P17787 502 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 C5AR1P21730 350 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 SOX5P35711 763 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 FLT3P36888 993 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 SCNN1AP37088 669 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 PI4KAP42356 2102 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 METAP1P53582 386 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 CDH4P55283 916 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 NOMO3P69849 1222 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 TEAD4Q15561 434 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 C5orf22Q49AR2 442 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 ALFQ53S48 1182 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 IL27RAQ6UWB1 636 aa12.27□□□□□ -0.45
CCHCR1-215ENST00000488920 ZNF683Q8IZ20 524 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms