RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ACAP1Q15027 740 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 SLC18A3Q16572 532 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 SH3PXD2AQ5TCZ1 1133 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 KIAA1211LQ6NV74 962 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 ZNF783Q6ZMS7 281 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 LPCAT2Q7L5N7 544 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 TFAP2DQ7Z6R9 452 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 C14orf80Q86SX3 495 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 SUMF1Q8NBK3 374 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 ERLEC1Q96DZ1 483 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 SIPA1Q96FS4 1042 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 LMLNQ96KR4 655 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 EIF3CQ99613 913 aaKnown RBP13.25□□□□□ -0.29
PHF1-210ENST00000488767 FEM1AQ9BSK4 669 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 TMEM245Q9H330 911 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 TMPRSS4Q9NRS4 437 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 ARHGAP20Q9P2F6 1191 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 ERVW-1Q9UQF0 538 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 SNX10Q9Y5X0 201 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 ATG2BQ96BY7 2078 aa13.25□□□□□ -0.29
PHF1-210ENST00000488767 MYO15AQ9UKN7 3530 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 EDDM13A0A1B0GTR0 161 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 AP5Z1O43299 807 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 FOXD2O60548 495 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 NDUFS2O75306 463 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 CNTN5O94779 1100 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 DNTTP04053 509 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 RHOQP17081 205 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 L1CAMP32004 1257 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 HTR7P34969 479 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 P2RY2P41231 377 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 MAPKAPK2P49137 400 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 ADKP55263 362 aaKnown RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 MAPK8IP2Q13387 824 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 CAMK2GQ13555 558 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 PIGHQ14442 188 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 PTPRNQ16849 979 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 TTC31Q49AM3 519 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 ALFQ53S48 1182 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 CXorf57Q6NSI4 855 aaKnown RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 TMPRSS6Q8IU80 811 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 FAM160A2Q8N612 972 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 CCDC185Q8N715 623 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 ZC3H10Q96K80 434 aaKnown RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 MRGPRX1Q96LB2 322 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 CCDC114Q96M63 670 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 THAP2Q9H0W7 228 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 MPP6Q9NZW5 540 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 IP6K2Q9UHH9 426 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 INTS6Q9UL03 887 aaKnown RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 HPCAL4Q9UM19 191 aa13.24□□□□□ -0.29
PHF1-210ENST00000488767 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
PHF1-210ENST00000488767 ILVBLA1L0T0 632 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 TARSL2A2RTX5 802 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 I6L893 689 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 MYO1FO00160 1098 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 LRP3O75074 770 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 H2AFZP0C0S5 128 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 HLA-EP13747 358 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 MZF1P28698 734 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 EPHB2P29323 1055 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 OXTRP30559 389 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 HOXC13P31276 330 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 DPP6P42658 865 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 GFPT1Q06210 699 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 ASTE1Q2TB18 679 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 HNRNPA1L2Q32P51 320 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 PLK5Q496M5 336 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 ACCSLQ4AC99 568 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 SPDYCQ5MJ68 293 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 ZNF776Q68DI1 518 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 RETSATQ6NUM9 610 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 H2AFVQ71UI9 128 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 DSG4Q86SJ6 1040 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 METTL3Q86U44 580 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 KBTBD6Q86V97 674 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 DNAAF5Q86Y56 855 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 PSTKQ8IV42 348 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 DCAF4L2Q8NA75 395 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 RLN3Q8WXF3 142 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 RPL10LQ96L21 214 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 SPON2Q9BUD6 331 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 NUP85Q9BW27 656 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 NHEJ1Q9H9Q4 299 aaPredicted RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
PHF1-210ENST00000488767 CTTNBP2NLQ9P2B4 639 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 UVRAGQ9P2Y5 699 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 FZD10Q9ULW2 581 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 SCML1Q9UN30 329 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 CYP8B1Q9UNU6 501 aa13.23□□□□□ -0.29
PHF1-210ENST00000488767 AP4E1Q9UPM8 1137 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms