RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 FAM90A20PA6NIJ5 464 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 CCNT1O60563 726 aaKnown RBP4.9□□□□□ -1.63
PTEN-204ENST00000487939 TULP3O75386 442 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 KRT38O76015 456 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 PRPH2P23942 346 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 CHRNA5P30532 468 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 NR4A2P43354 598 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 ALDH7A1P49419 539 aaKnown RBP4.9□□□□□ -1.63
PTEN-204ENST00000487939 ARL4CP56559 192 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 ACTR2P61160 394 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 PDCLQ13371 301 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 ANKRD45Q5TZF3 282 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 SYNE3Q6ZMZ3 975 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 RASGRP2Q7LDG7 609 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 PIP4P1Q86T03 277 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 MMP21Q8N119 569 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 SPPL3Q8TCT6 385 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 SCARB1Q8WTV0 552 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 WDR83Q9BRX9 315 aaKnown RBP4.9□□□□□ -1.63
PTEN-204ENST00000487939 THSD1Q9NS62 852 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 DECR2Q9NUI1 292 aa4.9□□□□□ -1.63
PTEN-204ENST00000487939 SETD1BQ9UPS6 1966 aaKnown RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 TMEM247A6NEH6 219 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTEN-204ENST00000487939 BMP15O95972 392 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 HLA-DQA2P01906 255 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 TK1P04183 234 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 WNT1P04628 370 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 CYP21A2P08686 494 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 TNNT1P13805 278 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 PKMP14618 531 aaKnown RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 CHN1P15882 459 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 GSTM2P28161 218 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 HALP42357 657 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 CUL4BQ13620 913 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 INPP5JQ15735 1006 aaPredicted RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 ARL13AQ5H913 290 aaPredicted RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 PIK3CD-AS1Q5SR53 167 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 MANEAQ5SRI9 462 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 C6orf10Q5SRN2 563 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 KIAA1324Q6UXG2 1013 aaKnown RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 PIM3Q86V86 326 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 IGFN1Q86VF2 1251 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 MOGAT3Q86VF5 341 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 NRACQ8N912 160 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 ANKRD42Q8N9B4 389 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 CSGALNACT1Q8TDX6 532 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 AFG1LQ8WV93 481 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 TBC1D20Q96BZ9 403 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 KTI12Q96EK9 354 aaPredicted RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 PSMD1Q99460 953 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 TRIM31Q9BZY9 425 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 FOXP1Q9H334 677 aaPredicted RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 TASP1Q9H6P5 420 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 PPCSQ9HAB8 311 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 SEMA4BQ9NPR2 832 aaPredicted RBP4.89□□□□□ -1.63
PTEN-204ENST00000487939 ARL15Q9NXU5 204 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 MSRB1Q9NZV6 116 aa4.89□□□□□ -1.63
PTEN-204ENST00000487939 CXorf65A6NEN9 183 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 FOXO6A8MYZ6 492 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 PNPLA4P41247 253 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 PAPOLAP51003 745 aaKnown RBP4.88□□□□□ -1.63
PTEN-204ENST00000487939 RPS6KA3P51812 740 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 PMPCAQ10713 525 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 SMTNL2Q2TAL5 461 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 GXYLT1Q4G148 440 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 RUNDC3AQ59EK9 446 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 ALG10Q5BKT4 473 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 ALG10BQ5I7T1 473 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 VWA5B1Q5TIE3 1220 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 SLC30A9Q6PML9 568 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 B4GALNT4Q76KP1 1039 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 TRAPPC11Q7Z392 1133 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 FTSJ3Q8IY81 847 aaKnown RBP4.88□□□□□ -1.63
PTEN-204ENST00000487939 TMEM57Q8N5G2 664 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 FAM110DQ8TAY7 271 aaPredicted RBP4.88□□□□□ -1.63
PTEN-204ENST00000487939 IP6K1Q92551 441 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 KCNJ9Q92806 393 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 ZNF48Q96MX3 618 aaPredicted RBP4.88□□□□□ -1.63
PTEN-204ENST00000487939 CLPBQ9H078 707 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 AAMDCQ9H7C9 122 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 PLEKHA2Q9HB19 425 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 SLC22A11Q9NSA0 550 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 RCE1Q9Y256 329 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 DERAQ9Y315 318 aa4.88□□□□□ -1.63
PTEN-204ENST00000487939 IGLV5-39A0A0G2JS06 123 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 SAC3D1A6NKF1 404 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 ZNF814B7Z6K7 855 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 EIF3JO75822 258 aaKnown RBP4.87□□□□□ -1.63
PTEN-204ENST00000487939 SYF2O95926 243 aaKnown RBP4.87□□□□□ -1.63
PTEN-204ENST00000487939 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 CYP4B1P13584 511 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 TBXAS1P24557 533 aaPredicted RBP4.87□□□□□ -1.63
PTEN-204ENST00000487939 CYP2J2P51589 502 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 RHAGQ02094 409 aa4.87□□□□□ -1.63
PTEN-204ENST00000487939 GAD2Q05329 585 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms