RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 TGFB1P01137 390 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 CFIP05156 583 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 CKMP06732 381 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ADRB2P07550 413 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ATP6V1B1P15313 513 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 LAMA1P25391 3075 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 P2RY2P41231 377 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 TNFSF9P41273 254 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NASPP49321 788 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 TAF6P49848 677 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 LIG4P49917 911 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 GSTM4Q03013 218 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 GFPT1Q06210 699 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 MAPK7Q13164 816 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 SYCP1Q15431 976 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ZNF77Q15935 545 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 DUOXA1Q1HG43 343 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 SPRED3Q2MJR0 410 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 HSF5Q4G112 596 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 SOWAHCQ53LP3 525 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 EOGTQ5NDL2 527 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 TTC38Q5R3I4 469 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC122Q5T0U0 273 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 INTS11Q5TA45 600 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 C9orf57Q5W0N0 161 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 LYSMD4Q5XG99 296 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 C19orf48Q6RUI8 117 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 C1orf186Q6ZWK4 172 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ZBTB46Q86UZ6 589 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ZDHHC13Q8IUH4 622 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 TMEFF1Q8IYR6 380 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC33Q8N5R6 958 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NECAB1Q8N987 351 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 FSIP1Q8NA03 581 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NSUN7Q8NE18 718 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 MDGA1Q8NFP4 955 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 OLIG1Q8TAK6 271 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 MGARPQ8TDB4 240 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 GTF3C6Q969F1 213 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NACC2Q96BF6 587 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 MFSD3Q96ES6 412 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 RSRC1Q96IZ7 334 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 SMAD5Q99717 465 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 PYM1Q9BRP8 204 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 NRSN2Q9GZP1 204 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 FOXP1Q9H334 677 aaPredicted RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ZNF304Q9HCX3 659 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 TRPC7Q9HCX4 862 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 AIPL1Q9NZN9 384 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 LARSQ9P2J5 1176 aaKnown RBP7.14□□□□□ -1.27
HDAC3-209ENST00000486618 WDR35Q9P2L0 1181 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ADAMTS9Q9P2N4 1935 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 HIF3AQ9Y2N7 669 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 DERAQ9Y315 318 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 WNT6Q9Y6F9 365 aa7.14□□□□□ -1.27
HDAC3-209ENST00000486618 ANAPC1Q9H1A4 1944 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 PLXND1Q9Y4D7 1925 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 DMXL2Q8TDJ6 3036 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SETXQ7Z333 2677 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 GCN1Q92616 2671 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 A0A0B4J203 849 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 F5H423 210 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 K7EQS6 105 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 HNRNPDLO14979 420 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 AP5Z1O43299 807 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CPNE3O75131 537 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 PGRP06401 933 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SYPP08247 313 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SERPINF2P08697 491 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 FERP16591 822 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CPEP16870 476 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 HDCP19113 662 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 BTF3P20290 206 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 GARTP22102 1010 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 GALNSP34059 522 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CD97P48960 835 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 PCDH1Q08174 1060 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SCAPQ12770 1279 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SLC14A1Q13336 389 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 KCNB1Q14721 858 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 TMEM132DQ14C87 1099 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 ME3Q16798 604 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 C10orf76Q5T2E6 689 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 HECTD3Q5T447 861 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 JADE1Q6IE81 842 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 FIP1L1Q6UN15 594 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 TMCO3Q6UWJ1 677 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SLC36A4Q6YBV0 504 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 BEND4Q6ZU67 534 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SRLQ86TD4 932 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 LRRC49Q8IUZ0 686 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 EFCAB13Q8IY85 973 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 LILRB1Q8NHL6 650 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 RIN3Q8TB24 985 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 SH3RF2Q8TEC5 729 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 THAP3Q8WTV1 239 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 RLN3Q8WXF3 142 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms