RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 VPS41P49754 854 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ERVK-21P61565 698 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ATP2C1P98194 919 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TLE2Q04725 743 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 YWHAHQ04917 246 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PPARAQ07869 468 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RALGDSQ12967 914 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 COASYQ13057 564 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 KLF10Q13118 480 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SLC14A1Q13336 389 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TUBA3CQ13748 450 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 LAMB3Q13751 1172 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZNF460Q14592 562 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ACAP2Q15057 778 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NPY5RQ15761 445 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 KBTBD12Q3ZCT8 623 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CRB2Q5IJ48 1285 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TOR1AIP1Q5JTV8 583 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 FBXO47Q5MNV8 452 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CAPRIN2Q6IMN6 1127 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TMTC3Q6ZXV5 915 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 BNIPLQ7Z465 357 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZNF804AQ7Z570 1209 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SLFN11Q7Z7L1 901 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ADCK1Q86TW2 530 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RSPH3Q86UC2 560 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CTAGE6Q86UF2 777 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RAB11FIP4Q86YS3 637 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CNGA4Q8IV77 575 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CTAGE4Q8IX94 777 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 THNSL1Q8IYQ7 743 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 GRAMD1CQ8IYS0 662 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CACNA2D3Q8IZS8 1091 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SLC7A5P1Q8MH63 180 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 GALNT15Q8N3T1 639 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 LCORLQ8N3X6 602 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CEP112Q8N8E3 955 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ERMNQ8TAM6 284 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZCCHC14Q8WYQ9 949 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ANKS1AQ92625 1134 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ESR2Q92731 530 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 HTRA1Q92743 480 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CDKL2Q92772 493 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NSUN4Q96CB9 384 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 LCORQ96JN0 433 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ATP6V1G3Q96LB4 118 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 WDR24Q96S15 920 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CDK5RAP1Q96SZ6 601 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TXN2Q99757 166 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RIOK1Q9BRS2 568 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NTPCRQ9BSD7 190 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SPXQ9BT56 116 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TBCDQ9BTW9 1192 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CNPPD1Q9BV87 410 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CD244Q9BZW8 370 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TRPV6Q9H1D0 765 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 MAGEH1Q9H213 219 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TMEM60Q9H2L4 133 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 BHMT2Q9H2M3 363 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 EHD1Q9H4M9 534 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 C8orf33Q9H7E9 229 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NRDE2Q9H7Z3 1164 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 COPS7BQ9H9Q2 264 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 FANCEQ9HB96 536 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PARVGQ9HBI0 331 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CRLF2Q9HC73 371 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PCDH18Q9HCL0 1135 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TRIM39Q9HCM9 518 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PDE11AQ9HCR9 933 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TM9SF3Q9HD45 589 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 DMRT3Q9NQL9 472 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RXFP3Q9NSD7 469 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 NMRK1Q9NWW6 199 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ACTR3BQ9P1U1 418 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 USP36Q9P275 1121 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 HDAC6Q9UBN7 1215 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 MTRF1LQ9UGC7 380 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 FBXO40Q9UH90 709 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SRP68Q9UHB9 627 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 RWDD2AQ9UIY3 292 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 EXOC7Q9UPT5 735 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZBTB1Q9Y2K1 713 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 MED16Q9Y2X0 877 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PCDHB6Q9Y5E3 794 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PCDHGB2Q9Y5G2 931 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 SESN1Q9Y6P5 492 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 CHD4Q14839 1912 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 ZNF831Q5JPB2 1677 aa4.19□□□□□ -1.74
PRPF38B-205ENST00000485810 PASKQ96RG2 1323 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 COL14A1Q05707 1796 aaKnown RBP4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 DLEC1Q9Y238 1755 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 LCHNA4D1U4 455 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 RGSL1A5PLK6 1076 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 GPR89AB7ZAQ6 455 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
PRPF38B-205ENST00000485810 K7EPI3 171 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms