RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 VPS33BQ9H267 617 aa3.61□□□□□ -1.83
VPS50-216ENST00000484954 C4orf47A7E2U8 309 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 BECN2A8MW95 431 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 LACTBL1A8MY62 500 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 ERVV-2B6SEH9 535 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 KCNJ18B7U540 433 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 MCIDASD6RGH6 385 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 SPTLC2O15270 562 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
VPS50-216ENST00000484954 CYP21A2P08686 494 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 TECP42680 631 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 GALNT1Q10472 559 aaPredicted RBP3.6□□□□□ -1.83
VPS50-216ENST00000484954 TRIM60Q495X7 471 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 HSP90AB2PQ58FF8 381 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 CCDC181Q5TID7 509 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 LIN54Q6MZP7 749 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 DLK2Q6UY11 383 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 GATAD2AQ86YP4 633 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 C7orf57Q8NEG2 295 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 FAM71BQ8TC56 605 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 HMGB4Q8WW32 186 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 NEUROG1Q92886 237 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 HDHD5Q9BXW7 423 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 ARHGAP39Q9C0H5 1083 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 ISCUQ9H1K1 167 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 TBC1D14Q9P2M4 693 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 PCDHA7Q9UN72 937 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 MAGED2Q9UNF1 606 aaPredicted RBP3.6□□□□□ -1.83
VPS50-216ENST00000484954 PROCRQ9UNN8 238 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 TNFSF13BQ9Y275 285 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 PCDHA10Q9Y5I2 948 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 CKAP5Q14008 2032 aa3.6□□□□□ -1.83
VPS50-216ENST00000484954 A0A087WV62 115 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 RPS10-NUDT3A0A1W2PQS6 291 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 TCRBV7S3A2A0A539 114 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 I6L893 689 aaPredicted RBP3.59□□□□□ -1.83
VPS50-216ENST00000484954 T-ENOLP0DO92 83 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 PDIA3P30101 505 aaKnown RBP3.59□□□□□ -1.83
VPS50-216ENST00000484954 ZXDBP98169 803 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 RHAGQ02094 409 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 ZNF569Q5MCW4 686 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 TMEM88Q6PEY1 159 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 SLC30A9Q6PML9 568 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 SLC16A12Q6ZSM3 486 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 TRILQ7L0X0 811 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 TMEM200AQ86VY9 491 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 CCDC25Q86WR0 208 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 ENGASEQ8NFI3 743 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 SCAMP5Q8TAC9 235 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 CTAGE1Q96RT6 745 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 ELAC2Q9BQ52 826 aaKnown RBP3.59□□□□□ -1.83
VPS50-216ENST00000484954 TMEM120AQ9BXJ8 343 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 POLDIP3Q9BY77 421 aaKnown RBP3.59□□□□□ -1.83
VPS50-216ENST00000484954 NLRC4Q9NPP4 1024 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 ARL15Q9NXU5 204 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 DAPP1Q9UN19 280 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 DTX4Q9Y2E6 619 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 PKP3Q9Y446 797 aa3.59□□□□□ -1.83
VPS50-216ENST00000484954 TRBV5-7A0A0A0MS05 114 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 A0A1B0GVT2 93 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 GOLGA6L3A6NEY3 463 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 INAFM1C9JVW0 142 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 FFAR2O15552 330 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 LYL1P12980 280 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PRPH2P23942 346 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 CDC25AP30304 524 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 RFX2P48378 723 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 RCAN1P53805 252 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 TMPRSS3P57727 454 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PTK2BQ14289 1009 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PFKFB4Q16877 469 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 GALNTL6Q49A17 601 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 ALG10Q5BKT4 473 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 ALG10BQ5I7T1 473 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 Q5PR19 223 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PARM1Q6UWI2 310 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 Q6ZTK2 550 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 USP43Q70EL4 1123 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 RNF144BQ7Z419 303 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 FBXL14Q8N1E6 418 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 SLC25A41Q8N5S1 370 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PRR26Q8N8Z3 221 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 KDM1BQ8NB78 822 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 CMASQ8NFW8 434 aaPredicted RBP3.58□□□□□ -1.84
VPS50-216ENST00000484954 CCDC136Q96JN2 1154 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
VPS50-216ENST00000484954 WDR77Q9BQA1 342 aaPredicted RBP3.58□□□□□ -1.84
VPS50-216ENST00000484954 KATNAL1Q9BW62 490 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.58□□□□□ -1.84
VPS50-216ENST00000484954 TASP1Q9H6P5 420 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PLAC1Q9HBJ0 212 aa3.58□□□□□ -1.84
VPS50-216ENST00000484954 PNRC2Q9NPJ4 139 aaKnown RBP3.58□□□□□ -1.84
VPS50-216ENST00000484954 MBD3L5A6NJ08 208 aaPredicted RBP3.57□□□□□ -1.84
VPS50-216ENST00000484954 GRM8O00222 908 aa3.57□□□□□ -1.84
VPS50-216ENST00000484954 RGS14O43566 566 aa3.57□□□□□ -1.84
VPS50-216ENST00000484954 LARGE1O95461 756 aa3.57□□□□□ -1.84
VPS50-216ENST00000484954 LCATP04180 440 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms