RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 RASA4O43374 803 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 JCHAINP01591 159 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 CREB1P16220 341 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 RHOQP17081 205 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 HMGA1P17096 107 aaKnown RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 CD68P34810 354 aaPredicted RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 ATP5C1P36542 298 aaKnown RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 VEPH1Q14D04 833 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 TAF12Q16514 161 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 SNX30Q5VWJ9 437 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 AFMIDQ63HM1 303 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 NUGGCQ68CJ6 796 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 TEKT5Q96M29 485 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 EBNA1BP2Q99848 306 aaKnown RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 GORASP1Q9BQQ3 440 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 DNMT3LQ9UJW3 386 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 TTLL3Q9Y4R7 772 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ACTL7BQ9Y614 415 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 OBSL1O75147 1896 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ZNF840PA6NDX5 716 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ARHGAP42A6NI28 874 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 PRRG1O14668 218 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 PIAS1O75925 651 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 GSTA2P09210 222 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 BRAFP15056 766 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 KRT15P19012 456 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 NFKB1P19838 968 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ELF1P32519 619 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 MSH2P43246 934 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 MTA1Q13330 715 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 PLD1Q13393 1074 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ACBD5Q5T8D3 534 aaPredicted RBP17.11■□□□□ 0.33
CTSA-207ENST00000484855 TFAP2DQ7Z6R9 452 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 CHSY1Q86X52 802 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 ZNF276Q8N554 614 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 DHRS4Q9BTZ2 278 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 DONSONQ9NYP3 566 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 TRPM5Q9NZQ8 1165 aa17.11■□□□□ 0.33
CTSA-207ENST00000484855 IGLV3-10A0A075B6K4 115 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 MAFKO60675 156 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 AP2A1O95782 977 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 PPIGQ13427 754 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTSA-207ENST00000484855 SPARCL1Q14515 664 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 KBTBD12Q3ZCT8 623 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 TIGD7Q6NT04 549 aaPredicted RBP17.1■□□□□ 0.33
CTSA-207ENST00000484855 FBXL22Q6P050 247 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 ADGRD1Q6QNK2 874 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 UNC5AQ6ZN44 842 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 TRABD2AQ86V40 505 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 CENPTQ96BT3 561 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 RABEP2Q9H5N1 569 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 KCNK9Q9NPC2 374 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 PPANQ9NQ55 473 aaKnown RBP17.1■□□□□ 0.33
CTSA-207ENST00000484855 INTS9Q9NV88 658 aaKnown RBP17.1■□□□□ 0.33
CTSA-207ENST00000484855 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 PIH1D1Q9NWS0 290 aaKnown RBP17.1■□□□□ 0.33
CTSA-207ENST00000484855 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
CTSA-207ENST00000484855 TMEM120BA0PK00 339 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 CNTN5O94779 1100 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 CCNB1P14635 433 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 PAPOLAP51003 745 aaKnown RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 SESN2P58004 480 aaPredicted RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 TWF1Q12792 350 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 ALFQ53S48 1182 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 CASC4Q6P4E1 433 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 C16orf59Q7L2K0 433 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 FIBCD1Q8N539 461 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 GSDMBQ8TAX9 411 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 ZSCAN18Q8TBC5 510 aaPredicted RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 IGSF8Q969P0 613 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 MYRFLQ96LU7 910 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 PRMT1Q99873 361 aaKnown RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 EPN3Q9H201 632 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.09■□□□□ 0.33
CTSA-207ENST00000484855 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 SRRM3A6NNA2 597 aaPredicted RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 ERI2A8K979 691 aaKnown RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 MATN3O15232 486 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 FGF18O76093 207 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 GJB5O95377 273 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 FGBP02675 491 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 MGAT1P26572 445 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 CA8P35219 290 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 KCNQ1P51787 676 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 PRPSAP1Q14558 356 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 BCAS4Q8TDM0 211 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 DCAKDQ8WVC6 231 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 TRMT2BQ96GJ1 504 aaKnown RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 RPRD1AQ96P16 312 aaPredicted RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 MLPHQ9BV36 600 aaPredicted RBP17.09■□□□□ 0.33
CTSA-207ENST00000484855 PLAC1Q9HBJ0 212 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 SENP1Q9P0U3 644 aa17.09■□□□□ 0.33
CTSA-207ENST00000484855 PCDHA11Q9Y5I1 949 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms