RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PMS2P54278 862 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 ZBTB16Q05516 673 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 COBLL1Q53SF7 1204 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 ALG10Q5BKT4 473 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 ALG10BQ5I7T1 473 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 FNBP1LQ5T0N5 605 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 DCAF12L2Q5VW00 463 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.81□□□□□ -1.64
SCAF11-207ENST00000484275 TRABD2AQ86V40 505 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 TTC30AQ86WT1 665 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 TM6SF1Q9BZW5 370 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 ZNF556Q9HAH1 456 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 SLC52A1Q9NWF4 448 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 TRPC5Q9UL62 973 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-207ENST00000484275 SLC12A4Q9UP95 1085 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 LCKP06239 509 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
SCAF11-207ENST00000484275 CHRNB2P17787 502 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 TNFSF4P23510 183 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 KLRK1P26718 216 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 TNFSF8P32971 234 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 SLC16A2P36021 539 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 ART1P52961 327 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 ADPRHP54922 357 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 IFIT5Q13325 482 aaKnown RBP4.8□□□□□ -1.64
SCAF11-207ENST00000484275 RAB30Q15771 203 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 DUSP6Q16828 381 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 IZUMO4Q1ZYL8 232 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 FBXO38Q6PIJ6 1188 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 Q6ZSV7 163 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 ARMC9Q7Z3E5 817 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 FAM217AQ8IXS0 508 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 CLEC4CQ8WTT0 213 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 BRI3BPQ8WY22 251 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 C18orf8Q96DM3 657 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 NECTIN3Q9NQS3 549 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 FZD10Q9ULW2 581 aa4.8□□□□□ -1.64
SCAF11-207ENST00000484275 MAGED2Q9UNF1 606 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-207ENST00000484275 C3orf70A6NLC5 250 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-207ENST00000484275 MCIDASD6RGH6 385 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 PMM2O15305 246 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 GRID2O43424 1007 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 DDNO94850 711 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-207ENST00000484275 ZNF432O94892 652 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 RHAGQ02094 409 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 KIF5AQ12840 1032 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 GFI1BQ5VTD9 330 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-207ENST00000484275 TMEM88Q6PEY1 159 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 FMNL3Q8IVF7 1028 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 TMEM217Q8N7C4 229 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 CMASQ8NFW8 434 aaPredicted RBP4.79□□□□□ -1.64
SCAF11-207ENST00000484275 ZNF566Q969W8 418 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 MECRQ9BV79 373 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 SARGQ9BW04 601 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 B3GNT4Q9C0J1 378 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 RNF146Q9NTX7 359 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 ZBTB1Q9Y2K1 713 aa4.79□□□□□ -1.64
SCAF11-207ENST00000484275 ERVV-2B6SEH9 535 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 CAMTA2O94983 1202 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 GLP2RO95838 553 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 MYL3P08590 195 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 GRK5P34947 590 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 ZP1P60852 638 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 HNF4GQ14541 408 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 DNTTIP2Q5QJE6 756 aaKnown RBP4.78□□□□□ -1.64
SCAF11-207ENST00000484275 C9orf57Q5W0N0 161 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 ZNF367Q7RTV3 350 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 C16orf82Q7Z2V1 217 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 CCDC25Q86WR0 208 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 TMPRSS12Q86WS5 348 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 FAM110DQ8TAY7 271 aaPredicted RBP4.78□□□□□ -1.64
SCAF11-207ENST00000484275 IPO4Q8TEX9 1081 aaKnown RBP4.78□□□□□ -1.64
SCAF11-207ENST00000484275 REXO5Q96IC2 774 aaKnown RBP4.78□□□□□ -1.64
SCAF11-207ENST00000484275 APOLD1Q96LR9 279 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 CDT1Q9H211 546 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 IGSF9Q9P2J2 1179 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 KLHL42Q9P2K6 505 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 DTX4Q9Y2E6 619 aa4.78□□□□□ -1.64
SCAF11-207ENST00000484275 COPG1Q9Y678 874 aaKnown RBP4.78□□□□□ -1.64
SCAF11-207ENST00000484275 SMTNL1A8MU46 457 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 KIF28PB7ZC32 967 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 ZBTB11O95625 1053 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-207ENST00000484275 PLGP00747 810 aaPredicted RBP4.77□□□□□ -1.65
SCAF11-207ENST00000484275 ZNF12P17014 697 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 CHRNA5P30532 468 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 HSPA7P48741 367 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 CLCN5P51795 746 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 PKP1Q13835 747 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 SAFBQ15424 915 aaKnown RBP eCLIP4.77□□□□□ -1.65
SCAF11-207ENST00000484275 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 FAM76BQ5HYJ3 339 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 ERAP2Q6P179 960 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 TMEM71Q6P5X7 295 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 GSG1LQ6UXU4 331 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 KLBQ86Z14 1044 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 RIPOR3Q96MK2 946 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 CCDC134Q9H6E4 229 aa4.77□□□□□ -1.65
SCAF11-207ENST00000484275 ICAM5Q9UMF0 924 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms