RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GABBR2O75899 941 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 SRPRAP08240 638 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 CKMT1AP12532 417 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC11A2P49281 568 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 CSRP3P50461 194 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 STAT4Q14765 748 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 C3orf38Q5JPI3 329 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 MSANTD2Q6P1R3 559 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 INO80CQ6PI98 192 aaPredicted RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 APCDD1Q8J025 514 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 EXD3Q8N9H8 876 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 UBA3Q8TBC4 463 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 APOLD1Q96LR9 279 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 MYOCQ99972 504 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 DNAI2Q9GZS0 605 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 NUCKS1Q9H1E3 243 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 MAGEF1Q9HAY2 307 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 THSD1Q9NS62 852 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 ABCC13Q9NSE7 274 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 IL17BQ9UHF5 180 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 TSPAN16Q9UKR8 245 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 SARDHQ9UL12 918 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 TPX2Q9ULW0 747 aaKnown RBP11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 SATB2Q9UPW6 733 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 DMTF1Q9Y222 760 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 U3KQA8 63 aa11.25□□□□□ -0.61
SMARCC1-205ENST00000483847 PIK3R2O00459 728 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 PLRG1O43660 514 aaKnown RBP11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 MAGEC1O60732 1142 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 CUTAO60888 179 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 NEFLP07196 543 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 THEGLP0DJG4 465 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 LCP1P13796 627 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 PRLRP16471 622 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 TBX4P57082 545 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC8A3P57103 927 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 DAOAP59103 153 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 SKOR1P84550 965 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 ECT2LQ008S8 904 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 OVGP1Q12889 678 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 NFATC3Q12968 1075 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 CDH18Q13634 790 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 ELAVL3Q14576 367 aaKnown RBP11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 ISXQ2M1V0 245 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 KMT5BQ4FZB7 885 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 NUGGCQ68CJ6 796 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 UNC45BQ8IWX7 931 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 SIX6OS1Q8N1H7 587 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 ZNF557Q8N988 423 aaPredicted RBP11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 KLHDC7BQ96G42 594 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 FRMD4BQ9Y2L6 1034 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 CEP83Q9Y592 693 aa11.24□□□□□ -0.61
SMARCC1-205ENST00000483847 PRAMEF26H0Y7S4 382 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 MAPK13O15264 365 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 PIAS2O75928 621 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 LUC7L3O95232 432 aaKnown RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 TGM2P21980 687 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 TAS2R38P59533 333 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 NFKB2Q00653 900 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 BST2Q10589 180 aaKnown RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 KCNMA1Q12791 1236 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 CNTN1Q12860 1018 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 SETMARQ53H47 684 aaPredicted RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 ZNF542PQ5EBM4 170 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 MS4A13Q5J8X5 152 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 COLEC12Q5KU26 742 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 AGBL4Q5VU57 503 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 RNF219Q5W0B1 726 aaPredicted RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 IGF2-ASQ6U949 168 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 TRIM69Q86WT6 500 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 CCDC150Q8NCX0 1101 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 CLEC4CQ8WTT0 213 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 KLK6Q92876 244 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 AZIN2Q96A70 460 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 ATXN7L3BQ96GX2 97 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 FCRL2Q96LA5 508 aaPredicted RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC46A1Q96NT5 459 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 NOX5Q96PH1 765 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 ABCG4Q9H172 646 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 TMEM8AQ9HCN3 771 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 KLHL11Q9NVR0 708 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 XPO7Q9UIA9 1087 aaKnown RBP11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 KIF26BQ2KJY2 2108 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 DOPEY2Q9Y3R5 2298 aa11.23□□□□□ -0.61
SMARCC1-205ENST00000483847 UTP20O75691 2785 aaKnown RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 CASC3O15234 703 aaKnown RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 SLC31A1O15431 190 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 NEBLO76041 1014 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 GP1BAP07359 652 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 NR2F2P24468 414 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 NUDT1P36639 197 aa11.22□□□□□ -0.61
SMARCC1-205ENST00000483847 RGS7P49802 495 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms