RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 CCDC34Q96HJ3 373 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 HSFY1Q96LI6 401 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 DDX50Q9BQ39 737 aaKnown RBP14.37□□□□□ -0.11
VARS-226ENST00000483275 INTS2Q9H0H0 1204 aaKnown RBP14.37□□□□□ -0.11
VARS-226ENST00000483275 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 MGAQ8IWI9 3026 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 ITIH6Q6UXX5 1313 aa14.37□□□□□ -0.11
VARS-226ENST00000483275 BIN1O00499 593 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 CAPN9O14815 690 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 SDC3O75056 442 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 LETM1O95202 739 aaPredicted RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 LDOC1O95751 146 aaPredicted RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 ITGAVP06756 1048 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 ITPKBP27987 946 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 EPHA8P29322 1005 aaPredicted RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 DRD3P35462 400 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 BNIP3Q12983 259 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 STILQ15468 1287 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 GJB7Q6PEY0 223 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 SPATS2Q86XZ4 545 aaKnown RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 OR52K2Q8NGK3 314 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 SAP25Q8TEE9 199 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 NELFBQ8WX92 580 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 AZIN2Q96A70 460 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 CEP63Q96MT8 703 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 MYOCQ99972 504 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 METTL14Q9HCE5 456 aaKnown RBP14.36□□□□□ -0.11
VARS-226ENST00000483275 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 GDF3Q9NR23 364 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 DKK4Q9UBT3 224 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 ADAMTS1Q9UHI8 967 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 SARDHQ9UL12 918 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 SCML1Q9UN30 329 aa14.36□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3DA0A087WVF3 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3IA0A087WXS9 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3EA0A087X179 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3KA0A087X1G2 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3FA6NER0 549 aaPredicted RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3LB9A6J9 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 THAP12O43422 761 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 GRAP2O75791 330 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 MOCS3O95396 460 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TRUB2O95900 331 aaKnown RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 ADH1BP00325 375 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 PRB1P04280 392 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 SRPRAP08240 638 aaKnown RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3HP0C7X1 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 GOT1P17174 413 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 ACADVLP49748 655 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 CCR5P51681 352 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 SEMG2Q02383 582 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 NNTQ13423 1086 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 STIM1Q13586 685 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 ARID5BQ14865 1188 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 HES3Q5TGS1 186 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3GQ6DHY5 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3CQ6IPX1 549 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TBC1D3Q8IZP1 549 aaPredicted RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 ZNF557Q8N988 423 aaPredicted RBP14.35□□□□□ -0.11
VARS-226ENST00000483275 ATMQ13315 3056 aa14.35□□□□□ -0.11
VARS-226ENST00000483275 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 C10orf142B7Z368 130 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 PPP1R3GB7ZBB8 358 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 F5H5T6 163 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 BNIP3LO60238 219 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 RFPL3O75679 317 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 ZIC2O95409 532 aaPredicted RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 IGLV3-25P01717 112 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 C5AR1P21730 350 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 NXPH1P58417 271 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 NUCB2P80303 420 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 GCNT1Q02742 428 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 KCNH2Q12809 1159 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 ELAVL3Q14576 367 aaKnown RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 CXorf57Q6NSI4 855 aaKnown RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 Q6ZVU0 165 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 SND1Q7KZF4 910 aaKnown RBP eCLIP14.34□□□□□ -0.11
VARS-226ENST00000483275 TRIM59Q8IWR1 403 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 EHBP1Q8NDI1 1231 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 FRS2Q8WU20 508 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 DHTKD1Q96HY7 919 aaPredicted RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 BTN2A3PQ96KV6 586 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 CRACR2AQ9BSW2 395 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 SLC4A5Q9BY07 1137 aa14.34□□□□□ -0.11
VARS-226ENST00000483275 GTPBP4Q9BZE4 634 aaKnown RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
VARS-226ENST00000483275 TENM4Q6N022 2769 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 A0A087WV48 116 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 TLR4O00206 839 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 PMM2O15305 246 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms