RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZNF564Q8TBZ8 553 aaPredicted RBP21.5■■□□□ 1.03
SEC13-217ENST00000482647 TBC1D31Q96DN5 1066 aa21.5■■□□□ 1.03
SEC13-217ENST00000482647 SEMA4AQ9H3S1 761 aa21.5■■□□□ 1.03
SEC13-217ENST00000482647 BCCIPQ9P287 314 aaKnown RBP eCLIP21.5■■□□□ 1.03
SEC13-217ENST00000482647 LCMT1Q9UIC8 334 aa21.5■■□□□ 1.03
SEC13-217ENST00000482647 RAD54BQ9Y620 910 aa21.5■■□□□ 1.03
SEC13-217ENST00000482647 TCRBV21S2A2A0A5A6 115 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 EIF3CLB5ME19 914 aaKnown RBP21.49■■□□□ 1.03
SEC13-217ENST00000482647 LILRB5O75023 590 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 LRCH4O75427 683 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 SRPRAP08240 638 aaKnown RBP21.49■■□□□ 1.03
SEC13-217ENST00000482647 RHOQP17081 205 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 ERMARDQ5T6L9 678 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 RASSF3Q86WH2 238 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 PSTKQ8IV42 348 aaKnown RBP21.49■■□□□ 1.03
SEC13-217ENST00000482647 PYROXD2Q8N2H3 581 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 NIPA2Q8N8Q9 360 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 KDM1BQ8NB78 822 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 FAM122AQ96E09 287 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 BTBD6Q96KE9 485 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 EIF3CQ99613 913 aaKnown RBP21.49■■□□□ 1.03
SEC13-217ENST00000482647 EPAS1Q99814 870 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 MUC3BQ9H195 1237 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 TMEM245Q9H330 911 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 VPS28Q9UK41 221 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 INTUQ9ULD6 942 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 USP18Q9UMW8 372 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 ERVW-1Q9UQF0 538 aa21.49■■□□□ 1.03
SEC13-217ENST00000482647 GOLGA6L6A8MZA4 724 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 CREB3O43889 395 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 EPHX1P07099 455 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 PRKCHP24723 683 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 HTR7P34969 479 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 CYLC1P35663 651 aaPredicted RBP21.48■■□□□ 1.03
SEC13-217ENST00000482647 SPA17Q15506 151 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 BOLA3Q53S33 107 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 KIAA1211LQ6NV74 962 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 ZNF783Q6ZMS7 281 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 PGBD3Q8N328 593 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 SPC24Q8NBT2 197 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 MDGA1Q8NFP4 955 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 OR52K2Q8NGK3 314 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 HMGB4Q8WW32 186 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 ALG14Q96F25 216 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 ZNF212Q9UDV6 495 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 SUN2Q9UH99 717 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 AP4E1Q9UPM8 1137 aa21.48■■□□□ 1.03
SEC13-217ENST00000482647 ILVBLA1L0T0 632 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 PROB1E7EW31 1015 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 LCA5LO95447 670 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 EPHB2P29323 1055 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 NNMTP40261 264 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 CTSOP43234 321 aaPredicted RBP21.47■■□□□ 1.03
SEC13-217ENST00000482647 MAGEA1P43355 309 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 MAPKAPK2P49137 400 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 SLC35G2Q8TBE7 412 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 MRGPRX3Q96LB0 322 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 PEBP4Q96S96 227 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 C2orf49Q9BVC5 232 aaPredicted RBP21.47■■□□□ 1.03
SEC13-217ENST00000482647 DHX35Q9H5Z1 703 aaKnown RBP21.47■■□□□ 1.03
SEC13-217ENST00000482647 LUC7LQ9NQ29 371 aaKnown RBP21.47■■□□□ 1.03
SEC13-217ENST00000482647 TMEM248Q9NWD8 314 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 OR51B4Q9Y5P0 310 aa21.47■■□□□ 1.03
SEC13-217ENST00000482647 HRO43593 1189 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 FECHP22830 423 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 KRT83P78385 493 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 SEMA3BQ13214 749 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 USP39Q53GS9 565 aaKnown RBP21.46■■□□□ 1.03
SEC13-217ENST00000482647 NLRP14Q86W24 1093 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 RHOT2Q8IXI1 618 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 NKD2Q969F2 451 aaPredicted RBP21.46■■□□□ 1.03
SEC13-217ENST00000482647 ERLEC1Q96DZ1 483 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 SNRNP25Q9BV90 132 aaKnown RBP21.46■■□□□ 1.03
SEC13-217ENST00000482647 CATSPERBQ9H7T0 1116 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 CD248Q9HCU0 757 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 GPATCH2LQ9NWQ4 482 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 EPN1Q9Y6I3 576 aaPredicted RBP21.46■■□□□ 1.03
SEC13-217ENST00000482647 MYO15AQ9UKN7 3530 aa21.46■■□□□ 1.03
SEC13-217ENST00000482647 MYO18AQ92614 2054 aaKnown RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 A0A0D9SEW6 157 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 RPP40O75818 363 aaKnown RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 PROSCO94903 275 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 IPO7O95373 1038 aaKnown RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 HLA-EP13747 358 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 GABRG2P18507 467 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 ETFBP38117 255 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 ZNF135P52742 658 aaPredicted RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 TPI1P60174 286 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 DAB2IPQ5VWQ8 1189 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 GAB3Q8WWW8 586 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 RPL10LQ96L21 214 aaKnown RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 PHOX2BQ99453 314 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 BAG1Q99933 345 aaPredicted RBP21.45■■□□□ 1.02
SEC13-217ENST00000482647 SPON2Q9BUD6 331 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 TPSD1Q9BZJ3 242 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 OSGEPQ9NPF4 335 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 DONSONQ9NYP3 566 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 SLCO3A1Q9UIG8 710 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 SLC25A13Q9UJS0 675 aa21.45■■□□□ 1.02
SEC13-217ENST00000482647 NEU3Q9UQ49 428 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms