RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLC6A18Q96N87 628 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 CCDC77Q9BR77 488 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 CELF4Q9BZC1 486 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 HAPLN2Q9GZV7 340 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DPH5Q9H2P9 285 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 PLEKHA5Q9HAU0 1116 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 APOBEC3GQ9HC16 384 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 ALG13Q9NP73 1137 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 EMC7Q9NPA0 242 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 CISHQ9NSE2 258 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 MORF4L1Q9UBU8 362 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ITGA11Q9UKX5 1188 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ZHX1Q9UKY1 873 aaPredicted RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 FZD1Q9UP38 647 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DRG1Q9Y295 367 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 C2CD2Q9Y426 696 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DOCK5Q9H7D0 1870 aa8.02□□□□□ -1.12
SNX13-208ENST00000482558 SCN4AP35499 1836 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 TMEM191CA6NGB0 347 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 UBOX5O94941 541 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 C22orf31O95567 290 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 HMGCRP04035 888 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ATF2P15336 505 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 GRIA2P42262 883 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 SESN3P58005 492 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 HTRA3P83110 453 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 MPP1Q00013 466 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 TFAMQ00059 246 aaKnown RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 MBTD1Q05BQ5 628 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 FSTL1Q12841 308 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ZNF268Q14587 947 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 SIX1Q15475 284 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 UAP1Q16222 522 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 KRT71Q3SY84 523 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 AGAP9Q5VTM2 703 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 MFSD5Q6N075 450 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 LCNL1Q6ZST4 164 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 MAMDC2Q7Z304 686 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 TBC1D1Q86TI0 1168 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 CCDC50Q8IVM0 306 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 LRRC56Q8IYG6 542 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 NXPE1Q8N323 547 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 OR5B17Q8NGF7 314 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 BCAS4Q8TDM0 211 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 AFG1LQ8WV93 481 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ASB11Q8WXH4 323 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 HDAC2Q92769 488 aaKnown RBP8.02□□□□□ -1.13
SNX13-208ENST00000482558 P3H4Q92791 437 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 DHRS1Q96LJ7 313 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 FGD4Q96M96 766 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 C11orf70Q9BRQ4 267 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 TRIM51Q9BSJ1 452 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 OSBPL8Q9BZF1 889 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 DCLK3Q9C098 648 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 MTMR12Q9C0I1 747 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ERVK-5Q9HDB9 667 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 GRHL1Q9NZI5 618 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 SAMD15Q9P1V8 674 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 SUSD2Q9UGT4 822 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 FBXO10Q9UK96 956 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 INVSQ9Y283 1065 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 SNX24Q9Y343 169 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 PTPRJQ12913 1337 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 UMODL1Q5DID0 1318 aa8.02□□□□□ -1.13
SNX13-208ENST00000482558 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 KLHL33A6NCF5 533 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 GLTPD2A6NH11 291 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 SIGLEC16A6NMB1 481 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 NDUFAB1O14561 156 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 RGS16O15492 202 aaPredicted RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 CLEC3AO75596 197 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 LEFTY1O75610 366 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 ARIH2O95376 493 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 CAPNS1P04632 268 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 LGALS2P05162 132 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 PYGLP06737 847 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 PGK2P07205 417 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 HARSP12081 509 aaKnown RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 AXLP30530 894 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 LSP1P33241 339 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 RPL21P46778 160 aaKnown RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 MARCKSL1P49006 195 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 MYL6P60660 151 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 RBP5P82980 135 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 DSG1Q02413 1049 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 KRT17Q04695 432 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 TRADDQ15628 312 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 LMBRD2Q68DH5 695 aaPredicted RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 SPOPLQ6IQ16 392 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 ZDHHC24Q6UX98 284 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 YTHDF3Q7Z739 585 aaKnown RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 FBXO16Q8IX29 292 aaPredicted RBP8.01□□□□□ -1.13
SNX13-208ENST00000482558 THNSL1Q8IYQ7 743 aa8.01□□□□□ -1.13
SNX13-208ENST00000482558 NDUFAF2Q8N183 169 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms