RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 IL1RL2Q9HB29 575 aa9.35□□□□□ -0.91
CALD1-220ENST00000482470 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
CALD1-220ENST00000482470 SAR1AQ9NR31 198 aa9.35□□□□□ -0.91
CALD1-220ENST00000482470 ARHGEF3Q9NR81 526 aa9.35□□□□□ -0.91
CALD1-220ENST00000482470 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TP73O15350 636 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 BPGMP07738 259 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 AXLP30530 894 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CRYBB1P53674 252 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 ZNF792Q3KQV3 632 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 KHDC1Q4VXA5 237 aaKnown RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 ZNF470Q6ECI4 717 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 FAM117BQ6P1L5 589 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CHSY1Q86X52 802 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TDRD5Q8NAT2 981 aaKnown RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 SKA2Q8WVK7 121 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 PRR11Q96HE9 360 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 SERPINI1Q99574 410 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 LRMDAQ9H2I8 198 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CATSPERBQ9H7T0 1116 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 SNX15Q9NRS6 342 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 HACD1B0YJ81 288 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 NRP1O14786 923 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 GSC2O15499 205 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 MTSS1O43312 755 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 MT-CYBP00156 380 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 HOXA11P31270 313 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 GJA5P36382 358 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 PTPN9P43378 593 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 INCA1Q0VD86 236 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CDH17Q12864 832 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 SLC39A12Q504Y0 691 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 OLFML2BQ68BL8 750 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 NCBP2-AS2Q69YL0 99 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TAF2Q6P1X5 1199 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 RINLQ6ZS11 566 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 BBS5Q8N3I7 341 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 EFHBQ8N7U6 833 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CATSPER2Q96P56 530 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 COLEC11Q9BWP8 271 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 NMRAL1Q9HBL8 299 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 KCNK4Q9NYG8 393 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TMEM216Q9P0N5 145 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 ACOT9Q9Y305 439 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 COL4A5P29400 1685 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 ARHGEF37A1IGU5 675 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TIMM44O43615 452 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TRIM13O60858 407 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 TSPAN8P19075 237 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 GCAP28676 217 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 RANBP1P43487 201 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 KPNA2P52292 529 aaKnown RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 CNGA3Q16281 694 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 DPYSL2Q16555 572 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 FAM110CQ1W6H9 321 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 DDIASQ8IXT1 998 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 GALNT4Q8N4A0 578 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 SCAMP5Q8TAC9 235 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 MOCOSQ96EN8 888 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 NDNQ99608 321 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 CADM1Q9BY67 442 aaKnown RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 TMEM165Q9HC07 324 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 NKX1-2Q9UD57 310 aaPredicted RBP9.34□□□□□ -0.91
CALD1-220ENST00000482470 PSAT1Q9Y617 370 aa9.34□□□□□ -0.91
CALD1-220ENST00000482470 ANKRD31Q8N7Z5 1873 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 PABPN1LA6NDY0 278 aaKnown RBP9.33□□□□□ -0.92
CALD1-220ENST00000482470 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 ABLIM1O14639 778 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 FAM189A1O60320 539 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 SUPT7LO94864 414 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 PIRTP0C851 137 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 GFAPP14136 432 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 AKR1A1P14550 325 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 STMN1P16949 149 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 CNTFP26441 200 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 CCR1P32246 355 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 PTPN7P35236 360 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 DDR2Q16832 855 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 UGP2Q16851 508 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 FAM187BQ17R55 369 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 CGB2Q6NT52 195 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 SLC41A1Q8IVJ1 513 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 RBM15BQ8NDT2 890 aaKnown RBP9.33□□□□□ -0.92
CALD1-220ENST00000482470 URGCPQ8TCY9 931 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 DENND1AQ8TEH3 1009 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 QKIQ96PU8 341 aaKnown RBP eCLIP9.33□□□□□ -0.92
CALD1-220ENST00000482470 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 FAM96AQ9H5X1 160 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 WDR55Q9H6Y2 383 aaPredicted RBP9.33□□□□□ -0.92
CALD1-220ENST00000482470 DMAP1Q9NPF5 467 aaPredicted RBP9.33□□□□□ -0.92
CALD1-220ENST00000482470 TAS2R1Q9NYW7 299 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 PLA2G4CQ9UP65 541 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 ARFGEF1Q9Y6D6 1849 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 DNAJC25-GNG10A0A024R161 153 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 CCL22O00626 93 aa9.33□□□□□ -0.92
CALD1-220ENST00000482470 GCATO75600 419 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms