RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 NR1I3Q14994 352 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 CDO1Q16878 200 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SKOR2Q2VWA4 1001 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-213ENST00000482192 ARL13BQ3SXY8 428 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 CCDC14Q49A88 953 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 TTC31Q49AM3 519 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-213ENST00000482192 WDR45BQ5MNZ6 344 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 STPG1Q5TH74 334 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 ZNF776Q68DI1 518 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-213ENST00000482192 PPP1R2P3Q6NXS1 205 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SLC23A3Q6PIS1 610 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 MON1BQ7L1V2 547 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 STRADAQ7RTN6 431 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 FAM131BQ86XD5 332 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SLC41A1Q8IVJ1 513 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 ZNF683Q8IZ20 524 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 JOSD2Q8TAC2 188 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 NAP1L5Q96NT1 182 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-213ENST00000482192 FEM1AQ9BSK4 669 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 GPR174Q9BXC1 333 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 NUSAP1Q9BXS6 441 aaKnown RBP12.23□□□□□ -0.45
HMGN1-213ENST00000482192 EDEM3Q9BZQ6 932 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 PCED1AQ9H1Q7 454 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 MTG2Q9H4K7 406 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 TMPRSS4Q9NRS4 437 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SLCO3A1Q9UIG8 710 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 VPS28Q9UK41 221 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 SCML1Q9UN30 329 aa12.23□□□□□ -0.45
HMGN1-213ENST00000482192 CFAP54Q96N23 3096 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 CKAP5Q14008 2032 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 IGLV3-10A0A075B6K4 115 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 DCDC2BA2VCK2 349 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ANKRD62A6NC57 917 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 DRGXA6NNA5 263 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 MEI4A8MW99 385 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 TTC34A8MYJ7 566 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 E9PAM4 449 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 GOLGA6L19H0YKK7 550 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SIN3BO75182 1162 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 CNTN5O94779 1100 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 CFIP05156 583 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 GPD1P21695 349 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 RFC1P35251 1148 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 STK19P49842 368 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 IRX4P78413 519 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ASIC2Q16515 512 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 DUOXA1Q1HG43 343 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ZSCAN23Q3MJ62 389 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ALFQ53S48 1182 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 C6orf118Q5T5N4 469 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SFMBT2Q5VUG0 894 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 DNAJC24Q6P3W2 148 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SETD3Q86TU7 594 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 FAM124AQ86V42 546 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 RGL4Q8IZJ4 473 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 OR52K2Q8NGK3 314 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ALG14Q96F25 216 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 RPL10LQ96L21 214 aaKnown RBP12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SYT11Q9BT88 431 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 ZYG11BQ9C0D3 744 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 MUC3BQ9H195 1237 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 TMEM9BQ9NQ34 198 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SUSD2Q9UGT4 822 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SLC6A14Q9UN76 642 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 OR51B4Q9Y5P0 310 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
HMGN1-213ENST00000482192 SPAG17Q6Q759 2223 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 METTL12A8MUP2 240 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 SRGAP2O75044 1071 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 GJB6O95452 261 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 RHOCP08134 193 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 SERPINF2P08697 491 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 GNSP15586 552 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 TNFAIP3P21580 790 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 OR1E1P30953 314 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 ADRA1BP35368 520 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 NUMBP49757 651 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 KRT83P78385 493 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 FANCCQ00597 558 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 GFPT1Q06210 699 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 SFSWAPQ12872 951 aaKnown RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 ELAVL3Q14576 367 aaKnown RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 CST6Q15828 149 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 FIGNQ5HY92 759 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 SH3PXD2AQ5TCZ1 1133 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 ACAD10Q6JQN1 1059 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 USP30Q70CQ3 517 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 TFAP2DQ7Z6R9 452 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 FAM172AQ8WUF8 416 aa12.21□□□□□ -0.45
HMGN1-213ENST00000482192 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.45
HMGN1-213ENST00000482192 PTPRN2Q92932 1015 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms