RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MAPK7Q13164 816 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 CEP78Q5JTW2 689 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 SLC9C2Q5TAH2 1124 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 LIPMQ5VYY2 423 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 SLC30A9Q6PML9 568 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 VPS52Q8N1B4 723 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 PAF1Q8N7H5 531 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 LSM14AQ8ND56 463 aaKnown RBP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 IP6K1Q92551 441 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 PIGKQ92643 395 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 NAP1L4Q99733 375 aaKnown RBP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 CLSTN3Q9BQT9 956 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 FRMD8Q9BZ67 464 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 TRIM31Q9BZY9 425 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 ERVK-5Q9HDB9 667 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 PDGFCQ9NRA1 345 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 FBXO4Q9UKT5 387 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 J3KRW8 73 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 PEX12O00623 359 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 INPPL1O15357 1258 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 HMGA2P52926 109 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 RHAGQ02094 409 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 TBX2Q13207 712 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 GXYLT1Q4G148 440 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 RUNDC3AQ59EK9 446 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 ARL13AQ5H913 290 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 EARS2Q5JPH6 523 aaKnown RBP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 KIAA1755Q5JYT7 1200 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 SH2D4BQ5SQS7 431 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 RETSATQ6NUM9 610 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 GALNT7Q86SF2 657 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 UEVLDQ8IX04 471 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 WIPF2Q8TF74 440 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 SEC62Q99442 399 aaKnown RBP6.27□□□□□ -1.41
SF3B1-210ENST00000482158 AGXT2Q9BYV1 514 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 ACAD9Q9H845 621 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 Q9N2J8 555 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 ANAPC4Q9UJX5 808 aa6.27□□□□□ -1.41
SF3B1-210ENST00000482158 WDR17Q8IZU2 1322 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 KCNJ18B7U540 433 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 WDHD1O75717 1129 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-210ENST00000482158 CYP4B1P13584 511 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 TNNT1P13805 278 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 TYK2P29597 1187 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 RPS6KA3P51812 740 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 ARHGAP8P85298 464 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 CFHR1Q03591 330 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 SLC10A2Q12908 348 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-210ENST00000482158 PGM5Q15124 567 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 PTF1AQ7RTS3 328 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 BRSK2Q8IWQ3 736 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 NTN5Q8WTR8 489 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-210ENST00000482158 ZBTB10Q96DT7 871 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 MPP4Q96JB8 637 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 TAOK3Q9H2K8 898 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 ARL15Q9NXU5 204 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 KLHL13Q9P2N7 655 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 SLC25A13Q9UJS0 675 aa6.26□□□□□ -1.41
SF3B1-210ENST00000482158 SH2D7A6NKC9 451 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-210ENST00000482158 C2CD4BA6NLJ0 364 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 SYN3O14994 580 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 ANP32CO43423 234 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 RNF8O76064 485 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 TUBB4AP04350 444 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 WNT1P04628 370 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 XBP1P17861 261 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 HNF1BP35680 557 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 MPP1Q00013 466 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 FOXF2Q12947 444 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 UBAP2Q5T6F2 1119 aaKnown RBP6.25□□□□□ -1.41
SF3B1-210ENST00000482158 NAPEPLDQ6IQ20 393 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-210ENST00000482158 GALNT16Q8N428 558 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 KAT2AQ92830 837 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 NELL1Q92832 810 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 RRP36Q96EU6 259 aaKnown RBP6.25□□□□□ -1.41
SF3B1-210ENST00000482158 SH2D3AQ9BRG2 576 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 MOV10Q9HCE1 1003 aaKnown RBP6.25□□□□□ -1.41
SF3B1-210ENST00000482158 UPB1Q9UBR1 384 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 TMEM98Q9Y2Y6 226 aa6.25□□□□□ -1.41
SF3B1-210ENST00000482158 TCRBV7S3A2A0A539 114 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 TP73O15350 636 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 WEE2P0C1S8 567 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 GSTM2P28161 218 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 MPGP29372 298 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 PSMC2P35998 433 aaKnown RBP6.24□□□□□ -1.41
SF3B1-210ENST00000482158 MTNR1AP48039 350 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 HSF1Q00613 529 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 BYSLQ13895 437 aaKnown RBP6.24□□□□□ -1.41
SF3B1-210ENST00000482158 ZNF268Q14587 947 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-210ENST00000482158 SLC4A8Q2Y0W8 1093 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 TMEM217Q8N7C4 229 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 TEX19Q8NA77 164 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 ST8SIA4Q92187 359 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 ZG16BQ96DA0 208 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 PIMREGQ9BSJ6 248 aa6.24□□□□□ -1.41
SF3B1-210ENST00000482158 QTRT1Q9BXR0 403 aaKnown RBP6.24□□□□□ -1.41
SF3B1-210ENST00000482158 MROH8Q9H579 483 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms