RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 ARFGAP1Q8N6T3 406 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 C3orf20Q8ND61 904 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 OR7D4Q8NG98 312 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 OR2T3Q8NH03 318 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 CENPIQ92674 756 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SIPA1Q96FS4 1042 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 FEM1AQ9BSK4 669 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 GPATCH2LQ9NWQ4 482 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 AIPL1Q9NZN9 384 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 KIAA1522Q9P206 1035 aaPredicted RBP11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 SLC12A6Q9UHW9 1150 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 PLA2G4CQ9UP65 541 aa11.74□□□□□ -0.53
RAPGEF1-207ENST00000481260 IGLV3-10A0A075B6K4 115 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 SIGLEC16A6NMB1 481 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 RHOBTB1O94844 696 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF806P0C7X5 589 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 GPD1P21695 349 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 SDC4P31431 198 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ADRA1BP35368 520 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 PRKCIP41743 596 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 PTPN9P43378 593 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ID4P47928 161 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 GSCP56915 257 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 IRX4P78413 519 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ECT2LQ008S8 904 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 C1QBPQ07021 282 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 MAMLD1Q13495 774 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 RABGAP1LQ5R372 815 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 LINGO4Q6UY18 593 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 LPCAT2Q7L5N7 544 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ARCQ7LC44 396 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 CYP2U1Q7Z449 544 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 CPNE8Q86YQ8 564 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 STK40Q8N2I9 435 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 NETO2Q8NC67 525 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 OR2I1PQ8NGU4 316 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 FRS2Q8WU20 508 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 LOXL4Q96JB6 756 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 SPACA7Q96KW9 195 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 HSPA12BQ96MM6 686 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 FAM129BQ96TA1 746 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 SELENOOQ9BVL4 669 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ITM2CQ9NQX7 267 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 MYO6Q9UM54 1294 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 TNRC6BQ9UPQ9 1833 aaKnown RBP11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 TBC1D30Q9Y2I9 924 aa11.73□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 LNP1A1A4G5 178 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 TYW5A2RUC4 315 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 NPC1O15118 1278 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 SMAD6O43541 496 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 F9P00740 461 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 FTLP02792 175 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 CALB1P05937 261 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 TCF4P15884 667 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 ACSL1P33121 698 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 ACVRL1P37023 503 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 KLHL30Q0D2K2 578 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF177Q13360 481 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 CA9Q16790 459 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 HNRNPA1L2Q32P51 320 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 POM121L1PQ3SYA9 428 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 LYSMD4Q5XG99 296 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 LEKR1Q6ZMV7 388 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 MMAAQ8IVH4 418 aaKnown RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 PRCCQ92733 491 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 PTPRN2Q92932 1015 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 PEBP4Q96S96 227 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 C6orf106Q9H6K1 298 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 DLL3Q9NYJ7 618 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 WSB2Q9NYS7 404 aaPredicted RBP11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 VPS51Q9UID3 782 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 PILRBQ9UKJ0 227 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 SARDHQ9UL12 918 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 PLXND1Q9Y4D7 1925 aa11.72□□□□□ -0.53
RAPGEF1-207ENST00000481260 RALGAPA1Q6GYQ0 2036 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 GOLGA6L19H0YKK7 550 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 MID1O15344 667 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 RRP9O43818 475 aaKnown RBP11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 LRP3O75074 770 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 CLDN11O75508 207 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 LRIG2O94898 1065 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 RHOCP08134 193 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 CD6P30203 668 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 PSMD8P48556 350 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 ZNF143P52747 638 aaPredicted RBP11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 PLK1P53350 603 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 CDH4P55283 916 aa11.71□□□□□ -0.53
RAPGEF1-207ENST00000481260 LMNB2Q03252 620 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms