RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 EXD3Q8N9H8 876 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 FAM131CQ96AQ9 280 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 RPL10LQ96L21 214 aaKnown RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 IRX2Q9BZI1 471 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 MAGEF1Q9HAY2 307 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 LRRC4Q9HBW1 653 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 CEP83Q9Y592 693 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 HEMK1Q9Y5R4 338 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 U3KQA8 63 aa17.94■□□□□ 0.46
HMGN1-212ENST00000479586 COL27A1Q8IZC6 1860 aaPredicted RBP17.94■□□□□ 0.46
HMGN1-212ENST00000479586 XPO1O14980 1071 aaKnown RBP17.93■□□□□ 0.46
HMGN1-212ENST00000479586 SPTLC2O15270 562 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 POLR2DO15514 142 aaKnown RBP17.93■□□□□ 0.46
HMGN1-212ENST00000479586 PLRG1O43660 514 aaKnown RBP17.93■□□□□ 0.46
HMGN1-212ENST00000479586 AFMP43652 599 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 NUMBP49757 651 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 ECT2LQ008S8 904 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 ELAVL3Q14576 367 aaKnown RBP17.93■□□□□ 0.46
HMGN1-212ENST00000479586 ISXQ2M1V0 245 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 MSANTD2Q6P1R3 559 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 IGF2-ASQ6U949 168 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 TRIM69Q86WT6 500 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 CFAP52Q8N1V2 620 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 KLHDC7BQ96G42 594 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 APOLD1Q96LR9 279 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 MYOCQ99972 504 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 FAM117AQ9C073 453 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 ABCG4Q9H172 646 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 ABCC13Q9NSE7 274 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 PPP4R2Q9NY27 417 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
HMGN1-212ENST00000479586 PMS2P1A4D2B8 440 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 PRAMEF26H0Y7S4 382 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 KLRC4O43908 158 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 GP1BAP07359 652 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 THEGLP0DJG4 465 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 RBMS1P29558 406 aaKnown RBP17.92■□□□□ 0.46
HMGN1-212ENST00000479586 NUDT1P36639 197 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 NFKB2Q00653 900 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 KCNMA1Q12791 1236 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 C6orf132Q5T0Z8 1188 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 NUGGCQ68CJ6 796 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 CCDC81Q6ZN84 652 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 UNC45BQ8IWX7 931 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 APCDD1Q8J025 514 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 SIX6OS1Q8N1H7 587 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 MAPK15Q8TD08 544 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 SEMA4DQ92854 862 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 ATXN7L3BQ96GX2 97 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 SLC46A1Q96NT5 459 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 NUCKS1Q9H1E3 243 aaKnown RBP17.92■□□□□ 0.46
HMGN1-212ENST00000479586 KDM4CQ9H3R0 1056 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 KLHL11Q9NVR0 708 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 SARDHQ9UL12 918 aa17.92■□□□□ 0.46
HMGN1-212ENST00000479586 AHCTF1Q8WYP5 2266 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 TYW5A2RUC4 315 aaKnown RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 PDXKO00764 312 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 TERTO14746 1132 aaKnown RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 LZTS3O60299 673 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 PIAS2O75928 621 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 TBX4P57082 545 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 CUL4AQ13619 759 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 SETMARQ53H47 684 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 AGBL4Q5VU57 503 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 RNF219Q5W0B1 726 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 TMEM145Q8NBT3 493 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 CCDC150Q8NCX0 1101 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 PRR11Q96HE9 360 aaPredicted RBP17.91■□□□□ 0.46
HMGN1-212ENST00000479586 TJP2Q9UDY2 1190 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 MTMR6Q9Y217 621 aa17.91■□□□□ 0.46
HMGN1-212ENST00000479586 KIF26BQ2KJY2 2108 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 LRRK2Q5S007 2527 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 SLC7A4O43246 635 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 PPP6R2O75170 966 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 LUC7L3O95232 432 aaKnown RBP17.9■□□□□ 0.46
HMGN1-212ENST00000479586 MOCS3O95396 460 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 ALPPL2P10696 532 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
HMGN1-212ENST00000479586 LCP1P13796 627 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 PRLRP16471 622 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 TGM2P21980 687 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 DAOAP59103 153 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 BST2Q10589 180 aaKnown RBP17.9■□□□□ 0.46
HMGN1-212ENST00000479586 CNTN1Q12860 1018 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 CLN3Q13286 438 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 ZSCAN23Q3MJ62 389 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 CCDC117Q8IWD4 279 aaPredicted RBP17.9■□□□□ 0.46
HMGN1-212ENST00000479586 UBA3Q8TBC4 463 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 IFI44Q8TCB0 444 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 KLK6Q92876 244 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 NLGN3Q9NZ94 848 aa17.9■□□□□ 0.46
HMGN1-212ENST00000479586 CDRT15L2A8MXV6 281 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 SLC31A1O15431 190 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 CUTAO60888 179 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 GABBR2O75899 941 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 CENPBP07199 599 aaPredicted RBP17.89■□□□□ 0.45
HMGN1-212ENST00000479586 LINC00303Q3SY05 128 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 DCAF6Q58WW2 860 aa17.89■□□□□ 0.45
HMGN1-212ENST00000479586 MS4A13Q5J8X5 152 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms