RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MYO16Q9Y6X6 1858 aa6.47□□□□□ -1.37
SF3B1-209ENST00000479532 LAMA3Q16787 3333 aa6.47□□□□□ -1.37
SF3B1-209ENST00000479532 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 H3BQ06 376 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SUSD5O60279 629 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MFAP3LO75121 409 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SOAT2O75908 522 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 FBXO21O94952 628 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SLU7O95391 586 aaKnown RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 VNN2O95498 520 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 GYPCP04921 128 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SERPING1P05155 500 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 RHOP08100 348 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PNMA6AP0CW24 399 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MYL4P12829 197 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 ATF6P18850 670 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 DDX6P26196 483 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 YWHAQP27348 245 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CASP14P31944 242 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PRKCIP41743 596 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 GPR15P49685 360 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CDR1P51861 262 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SLC5A3P53794 718 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CDR2Q01850 454 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CLUL1Q15846 466 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CCDC142Q17RM4 750 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 BBS9Q3SYG4 887 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 LEXMQ3ZCV2 418 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SYT10Q6XYQ8 523 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PAQR9Q6ZVX9 377 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 GRASPQ7Z6J2 395 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 DNAJB7Q7Z6W7 309 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TADA2BQ86TJ2 420 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TTC30AQ86WT1 665 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PASD1Q8IV76 773 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TTC9BQ8N6N2 239 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 C12orf76Q8N812 135 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MFSD2AQ8NA29 543 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SMRP1Q8NCR6 262 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 OR8K1Q8NGG5 319 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 UBA3Q8TBC4 463 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 OVCA2Q8WZ82 227 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TFAP2BQ92481 460 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 FAM168AQ92567 244 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MRPS31Q92665 395 aaKnown RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 FBXO32Q969P5 355 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TRMT2BQ96GJ1 504 aaKnown RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MSLNLQ96KJ4 702 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 HSFY1Q96LI6 401 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 KCNK16Q96T55 309 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MIPEPQ99797 713 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SMOQ99835 787 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 AGPAT1Q99943 283 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 PAIP2Q9BPZ3 127 aaKnown RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TRIM62Q9BVG3 475 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 YIPF2Q9BWQ6 316 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 APOL5Q9BWW9 433 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TTYH3Q9C0H2 523 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 LHX5Q9H2C1 402 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF446Q9NWS9 450 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 TRPM5Q9NZQ8 1165 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CLEC1BQ9P126 229 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 SUFUQ9UMX1 484 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MRPS23Q9Y3D9 190 aaKnown RBP6.46□□□□□ -1.38
SF3B1-209ENST00000479532 NR2E1Q9Y466 385 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 GREB1Q4ZG55 1949 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 CLUHO75153 1309 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 C2orf16Q68DN1 1984 aa6.46□□□□□ -1.38
SF3B1-209ENST00000479532 MYO7AQ13402 2215 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 LAMA2P24043 3122 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 FAM95CA0A1B0GW59 222 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ANKRD62A6NC57 917 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 AP5Z1O43299 807 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 MBTPS2O43462 519 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 TP53P04637 393 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 MMEP08473 750 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 RALAP11233 206 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 DESP17661 470 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 PFKLP17858 780 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 HSD3B2P26439 372 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 GABRR2P28476 465 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 ACTN2P35609 894 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 LTBRP36941 435 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 NSFP46459 744 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 TKTL1P51854 596 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 CORO7P57737 925 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 GSDMDP57764 484 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 MRPS5P82675 430 aaKnown RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 DLX2Q07687 328 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 CBX2Q14781 532 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 SDHAF4Q5VUM1 108 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 DENND1BQ6P3S1 775 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 SYCE2Q6PIF2 218 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 LEKR1Q6ZMV7 388 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 GET4Q7L5D6 327 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-209ENST00000479532 OTOP3Q7RTS5 596 aa6.45□□□□□ -1.38
SF3B1-209ENST00000479532 PIGZQ86VD9 579 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms