RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 IL22Q9GZX6 179 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 IL1RL2Q9HB29 575 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 IPPQ9Y573 584 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 CCDC88AQ3V6T2 1871 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 ZNF197O14709 1029 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 PSMC3P17980 439 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 SERPINB1P30740 379 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 OR1E1P30953 314 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 SOX11P35716 441 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 KPNA1P52294 538 aaPredicted RBP14.62□□□□□ -0.07
COL20A1-206ENST00000479501 PRKAA1Q13131 559 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 PLD3Q8IV08 490 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 PLD5Q8N7P1 536 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 CERS2Q96G23 380 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 CNGB3Q9NQW8 809 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 RIC8BQ9NVN3 520 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 AP4S1Q9Y587 144 aa14.62□□□□□ -0.07
COL20A1-206ENST00000479501 TMCC1O94876 653 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 UNC5CO95185 931 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 HSPA1AP0DMV8 641 aaKnown RBP14.61□□□□□ -0.07
COL20A1-206ENST00000479501 HSPA1BP0DMV9 641 aaKnown RBP14.61□□□□□ -0.07
COL20A1-206ENST00000479501 ABCG1P45844 678 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 SCNN1BP51168 640 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 POU4F1Q01851 419 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 SLC25A52Q3SY17 297 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 IRGCQ6NXR0 463 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 ZDHHC24Q6UX98 284 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 ZNF555Q8NEP9 628 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CRYGNQ8WXF5 182 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 TLCD1Q96CP7 247 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CNDP1Q96KN2 507 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 KLHL4Q9C0H6 718 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 NMRAL1Q9HBL8 299 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 FAM105AQ9NUU6 356 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 SEPT3Q9UH03 358 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 VPS26AO75436 327 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CRTAMO95727 393 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 RHOCP08134 193 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CD48P09326 243 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 WLSQ5T9L3 541 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 SCARA3Q6AZY7 606 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 OLA1Q9NTK5 396 aaKnown RBP14.61□□□□□ -0.07
COL20A1-206ENST00000479501 ZDHHC18Q9NUE0 388 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 KCNK4Q9NYG8 393 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 HEATR9A2RTY3 570 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 TPP1O14773 563 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 C22orf31O95567 290 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 RPL9P32969 192 aaKnown RBP14.61□□□□□ -0.07
COL20A1-206ENST00000479501 CCDC85BQ15834 202 aaPredicted RBP14.61□□□□□ -0.07
COL20A1-206ENST00000479501 UNC5AQ6ZN44 842 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 GPR141Q7Z602 305 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 PPP2R3CQ969Q6 453 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 TEPSINQ96N21 525 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 RNPEPL1Q9HAU8 725 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 ENTPD7Q9NQZ7 604 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 SOX13Q9UN79 622 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 PCDHA11Q9Y5I1 949 aa14.61□□□□□ -0.07
COL20A1-206ENST00000479501 GBE1Q04446 702 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 BST1Q10588 318 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 FASTKD3Q14CZ7 662 aaKnown RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 MFN1Q8IWA4 741 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 USP13Q92995 863 aaPredicted RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 TSPAN18Q96SJ8 248 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 TBL1YQ9BQ87 522 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 SYTL2Q9HCH5 934 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 CRLS1Q9UJA2 301 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 RNF112Q9ULX5 631 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 IRS2Q9Y4H2 1338 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 CBX4O00257 560 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 MYO1DO94832 1006 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 ENDOD1O94919 500 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 NFKB1P19838 968 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 S100A5P33763 92 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 FAM35AQ86V20 835 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 P2RY11Q96G91 374 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 CSPG4P5Q96PW8 444 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 SIKE1Q9BRV8 207 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 CKMP06732 381 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 MBL2P11226 248 aaPredicted RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 KCNK10P57789 538 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 ARHGEF7Q14155 803 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 KRT33BQ14525 404 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 RNASEH2BQ5TBB1 312 aaKnown RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 SLC26A9Q7LBE3 791 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 MICU2Q8IYU8 434 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 PIWIL2Q8TC59 973 aaKnown RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 ZNF398Q8TD17 642 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 APOL5Q9BWW9 433 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 UBXN6Q9BZV1 441 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 PHACTR1Q9C0D0 580 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 MORF4L1Q9UBU8 362 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 PHGDHO43175 533 aaKnown RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 TREHO43280 583 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 EDF1O60869 148 aaKnown RBP14.6□□□□□ -0.07
COL20A1-206ENST00000479501 CRABP2P29373 138 aa14.6□□□□□ -0.07
COL20A1-206ENST00000479501 OASLQ15646 514 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms