RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ASGR2P07307 311 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 PSMC3P17980 439 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 MZF1P28698 734 aaPredicted RBP13.45□□□□□ -0.26
CHD3-210ENST00000479080 CHKAP35790 457 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 KCNJ1P48048 391 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 GALNT2Q10471 571 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 AAK1Q2M2I8 961 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 ODF2Q5BJF6 829 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 MPP7Q5T2T1 576 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 IER5LQ5T953 404 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
CHD3-210ENST00000479080 MTSS1LQ765P7 747 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 NOA1Q8NC60 698 aaKnown RBP13.45□□□□□ -0.26
CHD3-210ENST00000479080 OR7D4Q8NG98 312 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.45□□□□□ -0.26
CHD3-210ENST00000479080 E2F7Q96AV8 911 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 HMCESQ96FZ2 354 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 DDX47Q9H0S4 455 aaKnown RBP13.45□□□□□ -0.26
CHD3-210ENST00000479080 LIMD1Q9UGP4 676 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 FBXO10Q9UK96 956 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 HEY1Q9Y5J3 304 aa13.45□□□□□ -0.26
CHD3-210ENST00000479080 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 RASA4BC9J798 803 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 NEDD8-MDP1E9PL57 170 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 SLC9A3R1O14745 358 aaPredicted RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 CHADO15335 359 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 RASA4O43374 803 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 PHF2O75151 1096 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CISD3P0C7P0 127 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 TYRP14679 529 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 ZFXP17010 805 aaPredicted RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 GLDCP23378 1020 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 GDI1P31150 447 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CD70P32970 193 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CETN2P41208 172 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 PTGIRP43119 386 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 GDF10P55107 478 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 LMAN2Q12907 356 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 SNX1Q13596 522 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 PRKD1Q15139 912 aaPredicted RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 PDGFRLQ15198 375 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CCDC181Q5TID7 509 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 DRICH1Q6PGQ1 229 aaPredicted RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 PRUNE1Q86TP1 453 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 PHTF2Q8N3S3 785 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CARNMT1Q8N4J0 409 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 GLIS1Q8NBF1 620 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 TTC8Q8TAM2 541 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 DDI1Q8WTU0 396 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 ARHGEF2Q92974 986 aaKnown RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 NKD2Q969F2 451 aaPredicted RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 QKIQ96PU8 341 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHD3-210ENST00000479080 LGMNQ99538 433 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 BBS2Q9BXC9 721 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 MAK16Q9BXY0 300 aaKnown RBP13.44□□□□□ -0.26
CHD3-210ENST00000479080 ECT2Q9H8V3 914 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 KCNK12Q9HB15 430 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 USP29Q9HBJ7 922 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 GTSE1Q9NYZ3 720 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 ACTL7AQ9Y615 435 aa13.44□□□□□ -0.26
CHD3-210ENST00000479080 CHD5Q8TDI0 1954 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 SHISA7A6NL88 538 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 NARSO43776 548 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 CACNG3O60359 315 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 MAFKO60675 156 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 ZMPSTE24O75844 475 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 CD160O95971 181 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 RHOCP08134 193 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 ADH5P11766 374 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 HLA-FP30511 346 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 OR1E1P30953 314 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 COILP38432 576 aaPredicted RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 OPRD1P41143 372 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 CSKP41240 450 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 SLC6A11P48066 632 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 PAPOLAP51003 745 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 NDST2P52849 883 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 EIF3EP60228 445 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 GNA12Q03113 381 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 ZP2Q05996 745 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 CKAP4Q07065 602 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 RUNX3Q13761 415 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 CCNG2Q16589 344 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 KIAA0907Q7Z7F0 614 aaPredicted RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 ZC3H18Q86VM9 953 aaKnown RBP13.43□□□□□ -0.26
CHD3-210ENST00000479080 MFN1Q8IWA4 741 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 SFTPA1Q8IWL2 248 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 APCDD1Q8J025 514 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 SLC44A3Q8N4M1 653 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHD3-210ENST00000479080 FIBINQ8TAL6 211 aa13.43□□□□□ -0.26
CHD3-210ENST00000479080 P3H4Q92791 437 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms