RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 HOXC13P31276 330 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 NUMBP49757 651 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 GALK1P51570 392 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 ZFYVE27Q5T4F4 411 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-206ENST00000478048 LRRC38Q5VT99 294 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 PEX26Q7Z412 305 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 POLNQ7Z5Q5 900 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 ANKS1BQ7Z6G8 1248 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 TFAP2DQ7Z6R9 452 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 SFTPA1Q8IWL2 248 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 OR52K2Q8NGK3 314 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 C8orf33Q9H7E9 229 aaPredicted RBP11.79□□□□□ -0.52
CBWD3-206ENST00000478048 DNAJC17Q9NVM6 304 aaKnown RBP11.79□□□□□ -0.52
CBWD3-206ENST00000478048 FBXO10Q9UK96 956 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 KIAA1549LQ6ZVL6 1849 aa11.79□□□□□ -0.52
CBWD3-206ENST00000478048 A0A1B0GVM2 712 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TCAF2A6NFQ2 919 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 C3orf70A6NLC5 250 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 H0Y626 953 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 PSTPIP1O43586 416 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 DCXO43602 365 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 LUC7L3O95232 432 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 KDELR1P24390 212 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 HLA-FP30511 346 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 CTNNA1P35221 906 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 PEX5P50542 639 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TPI1P60174 286 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 KDSRQ06136 332 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 DPYSL3Q14195 570 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 KRT81Q14533 505 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 PON2Q15165 354 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TTC39BQ5VTQ0 682 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TREML4Q6UXN2 200 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 RFX8Q6ZV50 586 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 NLRP14Q86W24 1093 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 RALGPS2Q86X27 583 aaPredicted RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 SYCE1Q8N0S2 351 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 SIX5Q8N196 739 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 PHTF2Q8N3S3 785 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 KCTD6Q8NC69 237 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 FAM71BQ8TC56 605 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 TSC1Q92574 1164 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 ALG3Q92685 438 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 CSPG4P5Q96PW8 444 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 XPO6Q96QU8 1125 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
CBWD3-206ENST00000478048 ZYG11BQ9C0D3 744 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 MFHAS1Q9Y4C4 1052 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 PCDHA3Q9Y5H8 950 aa11.78□□□□□ -0.52
CBWD3-206ENST00000478048 LRRD1A4D1F6 860 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CLDN11O75508 207 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 KRT1P04264 644 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 GLULP15104 373 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 RHOQP17081 205 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 ERCC2P18074 760 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 AMPD1P23109 780 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CTNNA2P26232 953 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CD70P32970 193 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DGKGP49619 791 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DNA2P51530 1060 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CDH4P55283 916 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 LMAN2Q12907 356 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CDH18Q13634 790 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DPYSQ14117 519 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 LLGL1Q15334 1064 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 GEN1Q17RS7 908 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CXorf57Q6NSI4 855 aaKnown RBP11.77□□□□□ -0.52
CBWD3-206ENST00000478048 NETO2Q8NC67 525 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 FIBINQ8TAL6 211 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 FAM3CQ92520 227 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 EZH1Q92800 747 aaPredicted RBP11.77□□□□□ -0.52
CBWD3-206ENST00000478048 EDAQ92838 391 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 LMLNQ96KR4 655 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 CALN1Q9BXU9 219 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 ABCB8Q9NUT2 735 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 ETNK2Q9NVF9 386 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 TMEM248Q9NWD8 314 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DEC1Q9P2X7 70 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 DNAI1Q9UI46 699 aa11.77□□□□□ -0.52
CBWD3-206ENST00000478048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-206ENST00000478048 H3BRJ5 948 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 MZF1P28698 734 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-206ENST00000478048 OR1E1P30953 314 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 ARL4AP40617 200 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 EIF2DP41214 584 aaKnown RBP11.77□□□□□ -0.53
CBWD3-206ENST00000478048 STARD6P59095 220 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 ZNF177Q13360 481 aaPredicted RBP11.77□□□□□ -0.53
CBWD3-206ENST00000478048 PDK2Q15119 407 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 ZNF569Q5MCW4 686 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 MEI1Q5TIA1 1274 aa11.77□□□□□ -0.53
CBWD3-206ENST00000478048 TMEM215Q68D42 235 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms