RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MT-CYBP00156 380 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 NR4A1P22736 598 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 EEF1B2P24534 225 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 TPI1P60174 286 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 MAXP61244 160 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 IRGCQ6NXR0 463 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 OTOP3Q7RTS5 596 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SLC41A1Q8IVJ1 513 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 TRIM42Q8IWZ5 723 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 PABPC5Q96DU9 382 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 ELMO2Q96JJ3 720 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 EBNA1BP2Q99848 306 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 ADAMTS6Q9UKP5 1117 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 BARX2Q9UMQ3 279 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SDR42E2A6NKP2 422 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 ZBBXA8MT70 800 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 CRCPO75575 148 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 USP17L7P0C7H9 530 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 MCF2P10911 925 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 ACADSP16219 412 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 GARSP41250 739 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 SKIV2L2P42285 1042 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 CSE1LP55060 971 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 CDH15P55291 814 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 CTC1Q2NKJ3 1217 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 DNAL1Q4LDG9 190 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 ZNF484Q5JVG2 852 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SDHAF4Q5VUM1 108 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 PACS1Q6VY07 963 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 HFE2Q6ZVN8 426 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 DENND6AQ8IWF6 608 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 PDCD6IPQ8WUM4 868 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 CDCA5Q96FF9 252 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 MRPL1Q9BYD6 325 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 MROH8Q9H579 483 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 TCF7L2Q9NQB0 619 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SNX15Q9NRS6 342 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 THAP1Q9NVV9 213 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 EGFL7Q9UHF1 273 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 DSEQ9UL01 958 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 FAF1Q9UNN5 650 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 MYO7AQ13402 2215 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 A0A0G2JLL6 359 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 A0A1B0GTW7 788 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 CASTOR2A6NHX0 329 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 AKAP10O43572 662 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 CILPO75339 1184 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 CLIC3O95833 236 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SPATA31D3P0C874 917 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 HDAC4P56524 1084 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 NSUN2Q08J23 767 aaKnown RBP eCLIP9.98□□□□□ -0.81
CMC1-209ENST00000477739 GK5Q6ZS86 529 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SPATA31D4Q6ZUB0 917 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 PRRT2Q7Z6L0 340 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 SKA1Q96BD8 255 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 PTCD3Q96EY7 689 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 KCTD15Q96SI1 283 aaPredicted RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 KCNK16Q96T55 309 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 STX18Q9P2W9 335 aaKnown RBP9.98□□□□□ -0.81
CMC1-209ENST00000477739 LOXHD1Q8IVV2 1947 aa9.98□□□□□ -0.81
CMC1-209ENST00000477739 ENDOD1O94919 500 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 POLBP06746 335 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PLOD1Q02809 727 aaPredicted RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 PDK3Q15120 406 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 DBN1Q16643 649 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 BOLA3Q53S33 107 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 SYPL2Q5VXT5 272 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 DHDDSQ86SQ9 333 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 DDIASQ8IXT1 998 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 MYO1HQ8N1T3 1032 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 MAPK15Q8TD08 544 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 GPR152Q8TDT2 470 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 CSPG4P5Q96PW8 444 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 LHX5Q9H2C1 402 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 RNF39Q9H2S5 420 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 ASB7Q9H672 318 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 DTLQ9NZJ0 730 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 LRRC42Q9Y546 428 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PPME1Q9Y570 386 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 C2CD4BA6NLJ0 364 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 KIF3CO14782 793 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 HUS1O60921 280 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 TM7SF2O76062 418 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 C22orf31O95567 290 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 ALDOAP04075 364 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 MPP1Q00013 466 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 FOLH1Q04609 750 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 MAP7Q14244 749 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 TRMT5Q32P41 509 aaKnown RBP9.97□□□□□ -0.81
CMC1-209ENST00000477739 FOXB2Q5VYV0 432 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 TRIM67Q6ZTA4 783 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 PIGZQ86VD9 579 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 TUBB6Q9BUF5 446 aa9.97□□□□□ -0.81
CMC1-209ENST00000477739 FSD1LQ9BXM9 530 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms