RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ZNF280DQ6N043 979 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 C1orf186Q6ZWK4 172 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 DNAJB7Q7Z6W7 309 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 FAM169BQ8N8A8 192 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 TMEM161BQ8NDZ6 487 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 STKLD1Q8NE28 680 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 OR10T2Q8NGX3 314 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 GAB3Q8WWW8 586 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 KIFAP3Q92845 792 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ZNF503Q96F45 646 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ZNF512Q96ME7 567 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ACAP3Q96P50 834 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 LSM14BQ9BX40 385 aaKnown RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 C8orf33Q9H7E9 229 aaPredicted RBP4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ASAH2Q9NR71 780 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 ANGPTL2Q9UKU9 493 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 CCL26Q9Y258 94 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 COL12A1Q99715 3063 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 TMEM131Q92545 1883 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 PHLPP2Q6ZVD8 1323 aa4.96□□□□□ -1.62
CKS1B-207ENST00000477676 NAV2Q8IVL1 2488 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CCDC169A6NNP5 214 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 H7C4K7 107 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 SLC16A4O15374 487 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 SUSD5O60279 629 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 EGFP01133 1207 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PROS1P07225 676 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 ADRB2P07550 413 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 ENO2P09104 434 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 OR52Z1P0C646 297 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 MCF2P10911 925 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 ARSAP15289 507 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 HMGA1P17096 107 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 XBP1P17861 261 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 GABRR2P28476 465 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 LRPAP1P30533 357 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CCT6AP40227 531 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 KPNA1P52294 538 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 GPR17Q13304 367 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 LRRC32Q14392 662 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PRKD1Q15139 912 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PPP2R5AQ15172 486 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CCDC142Q17RM4 750 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PLK5Q496M5 336 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 TMEM196Q5HYL7 178 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 DGKKQ5KSL6 1271 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 GPR158Q5T848 1215 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 TRIM68Q6AZZ1 485 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 RINT1Q6NUQ1 792 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 SLC39A4Q6P5W5 647 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 LRRTM3Q86VH5 581 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 RALGPS2Q86X27 583 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CCDC103Q8IW40 242 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 IGSF22Q8N9C0 903 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CSGALNACT1Q8TDX6 532 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PSMG2Q969U7 264 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 ZC3H10Q96K80 434 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 IFT74Q96LB3 600 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 NTPCRQ9BSD7 190 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 CCDC94Q9BW85 323 aaPredicted RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 MRPL4Q9BYD3 311 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 SLC6A20Q9NP91 592 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 GPR27Q9NS67 375 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 GKN1Q9NS71 199 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 DDX19AQ9NUU7 478 aaKnown RBP4.95□□□□□ -1.62
CKS1B-207ENST00000477676 SLC38A7Q9NVC3 462 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 ADAM29Q9UKF5 820 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 MAST4O15021 2626 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PTPRQQ9UMZ3 2332 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 DOCK9Q9BZ29 2069 aa4.95□□□□□ -1.62
CKS1B-207ENST00000477676 PCSK5Q92824 1860 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 MYLKQ15746 1914 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 LACTBL1A8MY62 500 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 TISP43B9A030 160 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 CDX4O14627 284 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 TRDMT1O14717 391 aaKnown RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 SMAD7O15105 426 aaKnown RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 RPP40O75818 363 aaKnown RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 ZNF202O95125 648 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 HNRNPLP14866 589 aaKnown RBP eCLIP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 ATF4P18848 351 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 MUTP22033 750 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 NMT1P30419 496 aaKnown RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 MPLP40238 635 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 GPR15P49685 360 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 GFRA1P56159 465 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 LILRA4P59901 499 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 YWHAHQ04917 246 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 MCL1Q07820 350 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 MAP4K2Q12851 820 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.622e-25■■■■□ 23.9
CKS1B-207ENST00000477676 ITPRIPL2Q3MIP1 535 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 AASDHQ4L235 1098 aaPredicted RBP4.94□□□□□ -1.62
CKS1B-207ENST00000477676 ARHGAP29Q52LW3 1261 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 TTC38Q5R3I4 469 aa4.94□□□□□ -1.62
CKS1B-207ENST00000477676 IL31Q6EBC2 164 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms