RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CAMK2GQ13555 558 aaPredicted RBP18.18■□□□□ 0.5
PTPN7-209ENST00000477554 FAM72AQ5TYM5 149 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 FAM72DQ6L9T8 149 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 WDR59Q6PJI9 974 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 FAM72BQ86X60 149 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 BAG1Q99933 345 aaPredicted RBP18.18■□□□□ 0.5
PTPN7-209ENST00000477554 TRIM7Q9C029 511 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 PRDM16Q9HAZ2 1276 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 SLC12A6Q9UHW9 1150 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 ERVW-1Q9UQF0 538 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 OR51B4Q9Y5P0 310 aa18.18■□□□□ 0.5
PTPN7-209ENST00000477554 TIMM44O43615 452 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ENDOD1O94919 500 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 FECHP22830 423 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ITPKAP23677 461 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 RDXP35241 583 aaKnown RBP18.17■□□□□ 0.5
PTPN7-209ENST00000477554 GSCP56915 257 aaPredicted RBP18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ELF2Q15723 593 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 CSRP2Q16527 193 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 C5orf22Q49AR2 442 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 BRMS1LQ5PSV4 323 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ACAD10Q6JQN1 1059 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 TFAP2DQ7Z6R9 452 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 TMTC1Q8IUR5 882 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 MCOLN2Q8IZK6 566 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 IRX2Q9BZI1 471 aaPredicted RBP18.17■□□□□ 0.5
PTPN7-209ENST00000477554 RRN3Q9NYV6 651 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 KIAA1522Q9P206 1035 aaPredicted RBP18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ZNF212Q9UDV6 495 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 PLA2G4CQ9UP65 541 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 NEU3Q9UQ49 428 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 ADAMTS9Q9P2N4 1935 aa18.17■□□□□ 0.5
PTPN7-209ENST00000477554 A0A1B0GVM2 712 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 TYW5A2RUC4 315 aaKnown RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 TCAF2A6NFQ2 919 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 E9PAM4 449 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 MAP3K13O43283 966 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 CCP110O43303 1012 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 SYNCRIPO60506 623 aaKnown RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 SRGAP2O75044 1071 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 SIN3BO75182 1162 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 KRT3P12035 628 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 GLDCP23378 1020 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 TPMTP51580 245 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 METAP1P53582 386 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 RPL6Q02878 288 aaKnown RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 STARD3Q14849 445 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 TDRD12Q587J7 1177 aaKnown RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 HGSNATQ68CP4 663 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 ARCQ7LC44 396 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 FAM124AQ86V42 546 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 PYROXD2Q8N2H3 581 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 MSANTD4Q8NCY6 345 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 C3orf20Q8ND61 904 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 FAM172AQ8WUF8 416 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 PIGKQ92643 395 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 CENPIQ92674 756 aaPredicted RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 LOXL4Q96JB6 756 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 MCEEQ96PE7 176 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 PSMB7Q99436 277 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 NDFIP2Q9NV92 336 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 USP36Q9P275 1121 aaKnown RBP18.16■□□□□ 0.5
PTPN7-209ENST00000477554 ACTL7AQ9Y615 435 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 SLCO1B1Q9Y6L6 691 aa18.16■□□□□ 0.5
PTPN7-209ENST00000477554 A0A0D9SEW6 157 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SSU72P8A0A1W2PR75 194 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SNAP91O60641 907 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 RHOBTB1O94844 696 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 TNFAIP3P21580 790 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 MAOBP27338 520 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 RABGAP1LQ5R372 815 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 C9orf64Q5T6V5 341 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 RNF219Q5W0B1 726 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 VPS36Q86VN1 386 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 OR2T3Q8NH03 318 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SIPA1Q96FS4 1042 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 TOE1Q96GM8 510 aaKnown RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SPACA7Q96KW9 195 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 FEM1AQ9BSK4 669 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SELENOOQ9BVL4 669 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SERGEFQ9UGK8 458 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 IGLV3-10A0A075B6K4 115 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SIGLEC16A6NMB1 481 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 DRGXA6NNA5 263 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 RNF103O00237 685 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 NPC1O15118 1278 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 MT-CO1P00395 513 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 CALB1P05937 261 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ATP5BP06576 529 aaKnown RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ZNF806P0C7X5 589 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 GPD1P21695 349 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 SDC4P31431 198 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 PTPN9P43378 593 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ID4P47928 161 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 RPS14P62263 151 aaKnown RBP18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ECT2LQ008S8 904 aa18.15■□□□□ 0.5
PTPN7-209ENST00000477554 ZNF252P-AS1Q0IIN9 211 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms