RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 LRRC8BQ6P9F7 803 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PACS1Q6VY07 963 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CYP4X1Q8N118 509 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 MAML3Q96JK9 1138 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 RRAGCQ9HB90 399 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 SLC24A3Q9HC58 644 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 FAM105AQ9NUU6 356 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 UBTFL6P0CB48 400 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 ADRA1BP35368 520 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 GABRB2P47870 512 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 CSE1LP55060 971 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 LAYNQ6UX15 382 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 APLFQ8IW19 511 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 KYQ8NBH2 561 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 NFKBIZQ9BYH8 718 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 BCO2Q9BYV7 579 aa14.93□□□□□ -0.02
HDAC6-220ENST00000477528 TRMT6Q9UJA5 497 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 RPL26L1Q9UNX3 145 aaKnown RBP14.93□□□□□ -0.02
HDAC6-220ENST00000477528 PAPSS1O43252 624 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-220ENST00000477528 GHRHRQ02643 423 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 ARHGAP17Q68EM7 881 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 MINDY3Q9H8M7 445 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 SYTL2Q9HCH5 934 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 SYBUQ9NX95 663 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 HMGXB4Q9UGU5 601 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 ZNF180Q9UJW8 692 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 PLLPQ9Y342 182 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 AKAP10O43572 662 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 E2F6O75461 281 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 ALDH2P05091 517 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 YWHAQP27348 245 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 IL1R2P27930 398 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 AARS2Q5JTZ9 985 aaKnown RBP14.92□□□□□ -0.02
HDAC6-220ENST00000477528 TXNRD3NBQ6F5E7 133 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 C15orf39Q6ZRI6 1047 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 FITM2Q8N6M3 262 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 PDP2Q9P2J9 529 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 DTNAQ9Y4J8 743 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 DNAJC6O75061 913 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 GCATO75600 419 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 MYL4P12829 197 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 KCNK10P57789 538 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 POU5F2Q8N7G0 328 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 LPPQ93052 612 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 AFF4Q9UHB7 1163 aaKnown RBP14.92□□□□□ -0.02
HDAC6-220ENST00000477528 VPS26AO75436 327 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 SERPINF2P08697 491 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 BFSP2Q13515 415 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 UGT3A1Q6NUS8 523 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 USP13Q92995 863 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-220ENST00000477528 ATXN3LQ9H3M9 355 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 PRKAG2Q9UGJ0 569 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 RNF112Q9ULX5 631 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 LAMB1P07942 1786 aa14.92□□□□□ -0.02
HDAC6-220ENST00000477528 ASMTLO95671 621 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 CCNB1P14635 433 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 INHBEP58166 350 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 WASHC5Q12768 1159 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 CDK5RAP1Q96SZ6 601 aaKnown RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 ING2Q9H160 280 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 LRMDAQ9H2I8 198 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 BCORQ6W2J9 1755 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 RTN3O95197 1032 aaPredicted RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 ECHS1P30084 290 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 OGDHQ02218 1023 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 RIPK1Q13546 671 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 PCDH19Q8TAB3 1148 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 TUBGCP3Q96CW5 907 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 TWNKQ96RR1 684 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 PCYT2Q99447 389 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 STN1Q9H668 368 aaKnown RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 YY1AP1Q9H869 796 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 LATS2Q9NRM7 1088 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 FAM95CA0A1B0GW59 222 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 MEI4A8MW99 385 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 H0Y626 953 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 PHGDHO43175 533 aaKnown RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 DCXO43602 365 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 LCA5Q86VQ0 697 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 LRRC49Q8IUZ0 686 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 NAT8LQ8N9F0 302 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 SPOCK2Q92563 424 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 HNRNPABQ99729 332 aaKnown RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 DPEP3Q9H4B8 488 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 CDHR5Q9HBB8 845 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 STARD7Q9NQZ5 370 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 TREHO43280 583 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 MFSD11O43934 449 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 ALDH1A1P00352 501 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 BPGMP07738 259 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 CRHR1P34998 444 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 ABCG1P45844 678 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 ARHGDIAP52565 204 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 FSTL1Q12841 308 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 OASLQ15646 514 aaKnown RBP14.91□□□□□ -0.02
HDAC6-220ENST00000477528 NEPROQ6NW34 567 aa14.91□□□□□ -0.02
HDAC6-220ENST00000477528 GALNT4Q8N4A0 578 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms