RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 PABPC3Q9H361 631 aaKnown RBP23.31■■□□□ 1.32
CNIH4-208ENST00000477413 WDCPQ9H6R7 721 aa23.31■■□□□ 1.32
CNIH4-208ENST00000477413 DNAAF2Q9NVR5 837 aaKnown RBP23.31■■□□□ 1.32
CNIH4-208ENST00000477413 COX16Q9P0S2 106 aa23.31■■□□□ 1.32
CNIH4-208ENST00000477413 VANGL2Q9ULK5 521 aa23.31■■□□□ 1.32
CNIH4-208ENST00000477413 CHD5Q8TDI0 1954 aa23.31■■□□□ 1.32
CNIH4-208ENST00000477413 EPG5Q9HCE0 2579 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 A0A1B0GTW7 788 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 MEI4A8MW99 385 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 GJB3O75712 270 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 UNGP13051 313 aaPredicted RBP23.3■■□□□ 1.32
CNIH4-208ENST00000477413 MZF1P28698 734 aaPredicted RBP23.3■■□□□ 1.32
CNIH4-208ENST00000477413 PMLP29590 882 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 CDH4P55283 916 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 SND1Q7KZF4 910 aaKnown RBP eCLIP23.3■■□□□ 1.322e-17■■■□□ 15.5
CNIH4-208ENST00000477413 CACUL1Q86Y37 369 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 ZDHHC5Q9C0B5 715 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 TKTL2Q9H0I9 626 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 SGK2Q9HBY8 427 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 OSGEPQ9NPF4 335 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 NLRC4Q9NPP4 1024 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 ADAMTS1Q9UHI8 967 aa23.3■■□□□ 1.32
CNIH4-208ENST00000477413 DRGXA6NNA5 263 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 SYPP08247 313 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 CEACAM1P13688 526 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 PDGFRAP16234 1089 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 ACSL1P33121 698 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 DEUP1Q05D60 604 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 PTP4A2Q12974 167 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 SEMA3BQ13214 749 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 DCAF12L1Q5VU92 463 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 C14orf80Q86SX3 495 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 PIP4P1Q86T03 277 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 NEK11Q8NG66 645 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 OR52K2Q8NGK3 314 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 FRS2Q8WU20 508 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 PTPRN2Q92932 1015 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 FAM131CQ96AQ9 280 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 HAPLN3Q96S86 360 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 FEM1AQ9BSK4 669 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 NAT10Q9H0A0 1025 aaKnown RBP23.29■■□□□ 1.32
CNIH4-208ENST00000477413 BTBD1Q9H0C5 482 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 MTG2Q9H4K7 406 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 FZD4Q9ULV1 537 aa23.29■■□□□ 1.32
CNIH4-208ENST00000477413 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.29■■□□□ 1.32
CNIH4-208ENST00000477413 TTC34A8MYJ7 566 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 ATP9BO43861 1147 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 RNASEH1O60930 286 aaKnown RBP23.28■■□□□ 1.32
CNIH4-208ENST00000477413 SEMA4FO95754 770 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 RDXP35241 583 aaKnown RBP23.28■■□□□ 1.32
CNIH4-208ENST00000477413 RNASE9P60153 205 aaKnown RBP23.28■■□□□ 1.32
CNIH4-208ENST00000477413 SHC2P98077 582 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 UBXN1Q04323 297 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 ELAVL3Q14576 367 aaKnown RBP23.28■■□□□ 1.32
CNIH4-208ENST00000477413 CST6Q15828 149 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 C2CD6Q53TS8 623 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 RNF219Q5W0B1 726 aaPredicted RBP23.28■■□□□ 1.32
CNIH4-208ENST00000477413 RGL4Q8IZJ4 473 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 AOPEPQ8N6M6 819 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 ZNF212Q9UDV6 495 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 SLCO3A1Q9UIG8 710 aa23.28■■□□□ 1.32
CNIH4-208ENST00000477413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 ATP1A3P13637 1013 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 PTPN9P43378 593 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 MAPK8P45983 427 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 NRG1Q02297 640 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 SFSWAPQ12872 951 aaKnown RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 SLC14A1Q13336 389 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 ZNF177Q13360 481 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 N4BP2L1Q5TBK1 243 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 PSAPL1Q6NUJ1 521 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 SETD3Q86TU7 594 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 PHF13Q86YI8 300 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 DHX40Q8IX18 779 aaKnown RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 MINDY1Q8N5J2 469 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 CFAP57Q96MR6 1250 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 FAM129BQ96TA1 746 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 C6orf106Q9H6K1 298 aaPredicted RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 METTL5Q9NRN9 209 aaKnown RBP23.27■■□□□ 1.32
CNIH4-208ENST00000477413 MYO6Q9UM54 1294 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 HS3ST2Q9Y278 367 aa23.27■■□□□ 1.32
CNIH4-208ENST00000477413 GOLGA8SH3BPF8 625 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 BCAT2O15382 392 aaPredicted RBP23.26■■□□□ 1.31
CNIH4-208ENST00000477413 ADH1BP00325 375 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 GGCXP38435 758 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 NNMTP40261 264 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 STK19P49842 368 aaPredicted RBP23.26■■□□□ 1.31
CNIH4-208ENST00000477413 NOVA1P51513 510 aaKnown RBP23.26■■□□□ 1.31
CNIH4-208ENST00000477413 GRIK2Q13002 908 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 CLEC16AQ2KHT3 1053 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 ANO6Q4KMQ2 910 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 SH3PXD2AQ5TCZ1 1133 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 ZCCHC9Q8N567 271 aaKnown RBP23.26■■□□□ 1.31
CNIH4-208ENST00000477413 RPL10LQ96L21 214 aaKnown RBP23.26■■□□□ 1.31
CNIH4-208ENST00000477413 PCDHB18PQ96TA0 734 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 FSCN3Q9NQT6 498 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 KNL1Q8NG31 2342 aa23.26■■□□□ 1.31
CNIH4-208ENST00000477413 C2CD4BA6NLJ0 364 aa23.25■■□□□ 1.31
CNIH4-208ENST00000477413 ALOX15BO15296 676 aa23.25■■□□□ 1.31
CNIH4-208ENST00000477413 CDK11BP21127 795 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms