RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 LRIG2O94898 1065 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 MT-CO1P00395 513 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 CYP1A2P05177 515 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 FNDC3BQ53EP0 1204 aaKnown RBP12.8□□□□□ -0.36
APTX-220ENST00000476858 RABGAP1LQ5R372 815 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 RNF219Q5W0B1 726 aaPredicted RBP12.8□□□□□ -0.36
APTX-220ENST00000476858 NLRP14Q86W24 1093 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 DRC7Q8IY82 874 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 CAMKK1Q8N5S9 505 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 WFIKKN2Q8TEU8 576 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 IQCDQ96DY2 449 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 C1orf74Q96LT6 269 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 NUP85Q9BW27 656 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 NOL6Q9H6R4 1146 aaKnown RBP12.8□□□□□ -0.36
APTX-220ENST00000476858 OR12D3Q9UGF7 316 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 ERVW-1Q9UQF0 538 aa12.8□□□□□ -0.36
APTX-220ENST00000476858 BZW2Q9Y6E2 419 aaKnown RBP12.8□□□□□ -0.36
APTX-220ENST00000476858 K7ERQ8 282 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 LRCH4O75427 683 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 EPHX1P07099 455 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 DLDP09622 509 aaKnown RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 MIPP30301 263 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 ACVRL1P37023 503 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 METAP1P53582 386 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 CDH4P55283 916 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 SEMA3BQ13214 749 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 TRIM14Q14142 442 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 EIF4HQ15056 248 aaKnown RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 CCDC6Q16204 474 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 MAP7D1Q3KQU3 841 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 SERPINA13PQ6UXR4 307 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 LINGO4Q6UY18 593 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 PRR23BQ6ZRT6 265 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 GAB3Q8WWW8 586 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 NKD2Q969F2 451 aaPredicted RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 NTAN1Q96AB6 310 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 MRGPRX1Q96LB2 322 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 KCTD15Q96SI1 283 aaPredicted RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 FEM1AQ9BSK4 669 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 SNRNP25Q9BV90 132 aaKnown RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 IRX2Q9BZI1 471 aaPredicted RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 KLC2Q9H0B6 622 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 EPC1Q9H2F5 836 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 PRSS16Q9NQE7 514 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 KIAA1522Q9P206 1035 aaPredicted RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 SMG5Q9UPR3 1016 aaKnown RBP12.79□□□□□ -0.36
APTX-220ENST00000476858 TBC1D30Q9Y2I9 924 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 MFHAS1Q9Y4C4 1052 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 CKAP5Q14008 2032 aa12.79□□□□□ -0.36
APTX-220ENST00000476858 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 GFRA3O60609 400 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 RPP40O75818 363 aaKnown RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 HOXB3P14651 431 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 SCAPQ12770 1279 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 SIM2Q14190 667 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 HSF5Q4G112 596 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 PREPLQ4J6C6 727 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 RWDD4Q6NW29 188 aaKnown RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 TP53INP2Q8IXH6 220 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 MRFAP1L1Q96HT8 127 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 FAM126AQ9BYI3 521 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 OSBPL2Q9H1P3 480 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 DUSP15Q9H1R2 295 aaPredicted RBP12.78□□□□□ -0.36
APTX-220ENST00000476858 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 PARD6AQ9NPB6 346 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 OSGEPQ9NPF4 335 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 BCCIPQ9P287 314 aaKnown RBP eCLIP12.78□□□□□ -0.36
APTX-220ENST00000476858 DNAI1Q9UI46 699 aa12.78□□□□□ -0.36
APTX-220ENST00000476858 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 CREB3O43889 395 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 SIN3BO75182 1162 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 CLDN11O75508 207 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 CD160O95971 181 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 LMNAP02545 664 aaKnown RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 RHOCP08134 193 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 P2RY2P41231 377 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 PLK1P53350 603 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 NRLP54845 237 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 TAS2R40P59535 323 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 NRG1Q02297 640 aaPredicted RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 CAMK2GQ13555 558 aaPredicted RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 SMTNL2Q2TAL5 461 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 PLK5Q496M5 336 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 KCNT1Q5JUK3 1230 aa12.77□□□□□ -0.37
APTX-220ENST00000476858 TTC39BQ5VTQ0 682 aaPredicted RBP12.77□□□□□ -0.37
APTX-220ENST00000476858 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms