RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 TMEM176AQ96HP8 235 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 DUSP16Q9BY84 665 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 EPC1Q9H2F5 836 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 FBRSQ9HAH7 460 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 EHD2Q9NZN4 543 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 CHMP5Q9NZZ3 219 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
CHD6-207ENST00000476641 SCML2Q9UQR0 700 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 CNOT1A5YKK6 2376 aaKnown RBP8.3□□□□□ -1.08
CHD6-207ENST00000476641 GON4LQ3T8J9 2241 aa8.3□□□□□ -1.08
CHD6-207ENST00000476641 ZNF638Q14966 1978 aaKnown RBP8.3□□□□□ -1.08
CHD6-207ENST00000476641 PRAMEF27A3QJZ7 478 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 DCLK1O15075 740 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 NUAK1O60285 661 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 STX10O60499 249 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 NFATC1O95644 943 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 CD19P15391 556 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 PFKLP17858 780 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 PPP3CCP48454 512 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 RGS7P49802 495 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 PDE6CP51160 858 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 UBE2HP62256 183 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 PDE4CQ08493 712 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 STIM1Q13586 685 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 LRRC14Q15048 493 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 CCDC6Q16204 474 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 C2orf27AQ580R0 203 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 ARHGAP17Q68EM7 881 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 C1orf228Q6PIY5 440 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 THAP5Q7Z6K1 395 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 MIB1Q86YT6 1006 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 TRIM59Q8IWR1 403 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 OVCA2Q8WZ82 227 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 KREMEN1Q96MU8 473 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 CRACR2AQ9BSW2 395 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 SRRTQ9BXP5 876 aaKnown RBP8.29□□□□□ -1.08
CHD6-207ENST00000476641 ULBP1Q9BZM6 244 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 CEP44Q9C0F1 390 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 NACA2Q9H009 215 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 ACP6Q9NPH0 428 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 TLR8Q9NR97 1041 aaKnown RBP8.29□□□□□ -1.08
CHD6-207ENST00000476641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
CHD6-207ENST00000476641 TSPAN16Q9UKR8 245 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 SH3BP1Q9Y3L3 701 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 MYOFQ9NZM1 2061 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 FANCMQ8IYD8 2048 aa8.29□□□□□ -1.08
CHD6-207ENST00000476641 E2F8A0AVK6 867 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 FAM170AA1A519 330 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 O00370 1275 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 FBXO24O75426 580 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 PAPSS2O95340 614 aaPredicted RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 CBX7O95931 251 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 KLKB1P03952 638 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 DRD1P21728 446 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TGM1P22735 817 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TUBP50607 506 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TKTL1P51854 596 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 LINC00310P59036 64 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 EFEMP1Q12805 493 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 SIM2Q14190 667 aaPredicted RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 DMC1Q14565 340 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 HSP90AA4PQ58FG1 418 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TMEM270Q6UE05 265 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TPGS1Q6ZTW0 290 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 IRF2BP1Q8IU81 584 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 CREBRFQ8IUR6 639 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 PPM1KQ8N3J5 372 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 ALLCQ8N6M5 410 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 ANKRD52Q8NB46 1076 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 USP33Q8TEY7 942 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 RUBCNQ92622 972 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 RMDN1Q96DB5 314 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 NT5C1BQ96P26 610 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 IER2Q9BTL4 223 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 SEMA4AQ9H3S1 761 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 SMOC1Q9H4F8 434 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 FBXO44Q9H4M3 255 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 METTL14Q9HCE5 456 aaKnown RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 COMMD8Q9NX08 183 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 PLK2Q9NYY3 685 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 NCDNQ9UBB6 729 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 RASAL2Q9UJF2 1139 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 AJAP1Q9UKB5 411 aaPredicted RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 PCDHB4Q9Y5E5 795 aa8.28□□□□□ -1.08
CHD6-207ENST00000476641 TPRP12270 2363 aaKnown RBP8.28□□□□□ -1.08
CHD6-207ENST00000476641 NEDD8-MDP1E9PL57 170 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 SGK1O00141 431 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 TULP3O75386 442 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 STC2O76061 302 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 KAT7O95251 611 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 KLF8O95600 359 aaPredicted RBP8.27□□□□□ -1.09
CHD6-207ENST00000476641 HOXA5P20719 270 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 ATP5C1P36542 298 aaKnown RBP8.27□□□□□ -1.09
CHD6-207ENST00000476641 WASP42768 502 aa8.27□□□□□ -1.09
CHD6-207ENST00000476641 YWHAGP61981 247 aaKnown RBP eCLIP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms