RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RBL1P28749 1068 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 YWHAEP62258 255 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 DUOXA2Q1HG44 320 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 FAM183BPQ6ZVS7 135 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 LRRC43Q8N309 656 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 PPP1R36Q96LQ0 422 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 RNF157Q96PX1 679 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 SORT1Q99523 831 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.58□□□□□ -1.04
VAPB-205ENST00000476395 GPATCH2LQ9NWQ4 482 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 GTF2IRD1Q9UHL9 959 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 CDC14AQ9UNH5 594 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 AP1G1O43747 822 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 STRNO43815 780 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 ALDOAP04075 364 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 ITGAXP20702 1163 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 DNAL1Q4LDG9 190 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 TREML2Q5T2D2 321 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 OGFRL1Q5TC84 451 aaPredicted RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 MBLAC2Q68D91 279 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 C16orf46Q6P387 395 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 KYAT3Q6YP21 454 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 WDR75Q8IWA0 830 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 LZTR1Q8N653 840 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 FAM156AQ8NDB6 213 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 TFB1MQ8WVM0 346 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 ATP2A3Q93084 1043 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 NACC2Q96BF6 587 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 PAIP1Q9H074 479 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 CDT1Q9H211 546 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 ACAD9Q9H845 621 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 ZFYVE28Q9HCC9 887 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 GBA2Q9HCG7 927 aaPredicted RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 MOCS1Q9NZB8 636 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 RSL24D1Q9UHA3 163 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 VPS51Q9UID3 782 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 PRELID1Q9Y255 219 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 COQ6Q9Y2Z9 468 aa8.58□□□□□ -1.04
VAPB-205ENST00000476395 HBS1LQ9Y450 684 aaKnown RBP8.58□□□□□ -1.04
VAPB-205ENST00000476395 NFKBIEO00221 500 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CSPG5O95196 566 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 FGF3P11487 239 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 ZFXP17010 805 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 EPHA3P29320 983 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PHBP35232 272 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TCF7P36402 384 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 AP3M2P53677 418 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 ATXN1P54253 815 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 OSTNP61366 133 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TOMM20Q15388 145 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 NANOGP8Q6NSW7 305 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 SLC26A11Q86WA9 606 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 RFX6Q8HWS3 928 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 KCTD6Q8NC69 237 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 AGR3Q8TD06 166 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 SLC7A3Q8WY07 619 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 MPHOSPH6Q99547 160 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 LPIN3Q9BQK8 851 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TEX13BQ9BXU2 312 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 MRPS26Q9BYN8 205 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 SEMA6AQ9H2E6 1030 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 KCNK4Q9NYG8 393 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 DNAJB4Q9UDY4 337 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 RNF11Q9Y3C5 154 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 GJA3Q9Y6H8 435 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 ZNF236Q9UL36 1845 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 F7P08709 466 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 GRM5P41594 1212 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 TFAMQ00059 246 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 PTPN11Q06124 597 aaPredicted RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 KCTD2Q14681 263 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CYP2A13Q16696 494 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 EML3Q32P44 896 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 SMUG1Q53HV7 270 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PACS1Q6VY07 963 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 CTAGE3PQ8IX95 158 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PALM2Q8IXS6 379 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PDIK1LQ8N165 341 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 PQLC1Q8N2U9 271 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 C12orf29Q8N999 325 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 FLCNQ8NFG4 579 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 RSAD2Q8WXG1 361 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 RANBP9Q96S59 729 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 SGIP1Q9BQI5 828 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 NDUFA13Q9P0J0 144 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 NXF1Q9UBU9 619 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 ZMAT5Q9UDW3 170 aaKnown RBP8.57□□□□□ -1.04
VAPB-205ENST00000476395 TCEAL9Q9UHQ7 104 aa8.57□□□□□ -1.04
VAPB-205ENST00000476395 AGTPBP1Q9UPW5 1226 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms