RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 NR5A2O00482 541 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SOAT2O75908 522 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RECQL4O94761 1208 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SETSIPP0DME0 302 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 GHRP10912 638 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 FUT4P22083 530 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 IGFBP6P24592 240 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 GSTT1P30711 240 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PWP1Q13610 501 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PTPRCAPQ14761 206 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SIX1Q15475 284 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PLA2G4EQ3MJ16 856 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 WSCD1Q658N2 575 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CLEC6AQ6EIG7 209 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ANO7Q6IWH7 933 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TRIM72Q6ZMU5 477 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 DENND6AQ8IWF6 608 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 KATNAL2Q8IYT4 538 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF781Q8N8C0 355 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TRPV1Q8NER1 839 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 APPL2Q8NEU8 664 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 BHLHE22Q8NFJ8 381 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 OR52K2Q8NGK3 314 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 RUBCNQ92622 972 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 UTP4Q969X6 686 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 HIC2Q96JB3 615 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TUBGCP5Q96RT8 1024 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 APOL5Q9BWW9 433 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SDCBP2Q9H190 292 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC68Q9H2F9 335 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 TUT1Q9H6E5 874 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SOX17Q9H6I2 414 aaPredicted RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 EBF2Q9HAK2 575 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 XPNPEP3Q9NQH7 507 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 KCND2Q9NZV8 630 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 PAK5Q9P286 719 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SLC12A4Q9UP95 1085 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 SSX2IPQ9Y2D8 614 aa5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MTO1Q9Y2Z2 717 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MYH9P35579 1960 aaKnown RBP5.1□□□□□ -1.59
CCDC39-204ENST00000476379 MANSC4A6NHS7 340 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF839A8K0R7 811 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 P4HA2O15460 535 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MFSD11O43934 449 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 GUCA1CO95843 209 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 KCNA2P16389 499 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 UGT1A6P19224 532 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 EFNA1P20827 205 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 BDNFP23560 247 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 AFF1P51825 1210 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 BCAT1P54687 386 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CDH15P55291 814 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 YWHAZP63104 245 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PHEXP78562 749 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 RBP5P82980 135 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 LAMB3Q13751 1172 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CAPRIN1Q14444 709 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 EFHC1Q5JVL4 640 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF470Q6ECI4 717 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CCDC81Q6ZN84 652 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 GK5Q6ZS86 529 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 YTHDF3Q7Z739 585 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CIR1Q86X95 450 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 BRSK2Q8IWQ3 736 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 C3orf20Q8ND61 904 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 OR6K2Q8NGY2 324 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 RNF139Q8WU17 664 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 DDX1Q92499 740 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF778Q96MU6 729 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 GAD1Q99259 594 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 CCT7Q99832 543 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 FICDQ9BVA6 458 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MRPL1Q9BYD6 325 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 RNF39Q9H2S5 420 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TRPC7Q9HCX4 862 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 RBMX2Q9Y388 322 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PPME1Q9Y570 386 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 QSER1Q2KHR3 1735 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ATXN2Q99700 1313 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SBF1O95248 1867 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 OR51F1A6NGY5 319 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ASS1P00966 412 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ANPEPP15144 967 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 YAP1P46937 504 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 NCKAP1LP55160 1127 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 STX1BP61266 288 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MPP1Q00013 466 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 MCL1Q07820 350 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF252P-AS1Q0IIN9 211 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PLCL1Q15111 1095 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 SWT1Q5T5J6 900 aaKnown RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 FAM43BQ6ZT52 329 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-204ENST00000476379 TAS2R42Q7RTR8 314 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 PIGZQ86VD9 579 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 C7orf57Q8NEG2 295 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 REPS2Q8NFH8 660 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 OR9I1Q8NGQ6 314 aa5.09□□□□□ -1.59
CCDC39-204ENST00000476379 HTR3CQ8WXA8 447 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms