RNA–Protein interactions for RNA: ENST00000476068.1

C1GALT1-207, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best)

Gene C1GALT1, Length 1,186 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-207ENST00000476068 USP53Q70EK8 1073 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 TRIM69Q86WT6 500 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 C12orf56Q8IXR9 622 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 ARL14Q8N4G2 192 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 PDILTQ8N807 584 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 EDEM1Q92611 657 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 PTPRN2Q92932 1015 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 FAM131CQ96AQ9 280 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 PRICKLE1Q96MT3 831 aaPredicted RBP13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 KLHL11Q9NVR0 708 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 SLCO3A1Q9UIG8 710 aa13.19□□□□□ -0.3
C1GALT1-207ENST00000476068 PRAMEF26H0Y7S4 382 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 K7ESM1 405 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 PLRG1O43660 514 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 NEBLO76041 1014 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 RPN1P04843 607 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 ITGB2P05107 769 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 VAV1P15498 845 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 NUDT1P36639 197 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 PIK3CAP42336 1068 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 TKTL1P51854 596 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 C4orf17Q53FE4 359 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 SETMARQ53H47 684 aaPredicted RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 FAM133BQ5BKY9 247 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 GUSBP11Q6P575 273 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 CRTC1Q6UUV9 634 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 KDM1BQ8NB78 822 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 TMEM145Q8NBT3 493 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 LINC00301Q8NCQ3 95 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 FIBINQ8TAL6 211 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 TAF4BQ92750 862 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 SGF29Q96ES7 293 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 ULBP1Q9BZM6 244 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 APOBEC3GQ9HC16 384 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 SEPT3Q9UH03 358 aa13.18□□□□□ -0.3
C1GALT1-207ENST00000476068 CPED1A4D0V7 1026 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 CASC3O15234 703 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 GJB6O95452 261 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 ZBED1O96006 694 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 HLA-DRAP01903 254 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 SRPRAP08240 638 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 PRLRP16471 622 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 NUMBP49757 651 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 STK19P49842 368 aaPredicted RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 RPS24P62847 133 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 TGIF1Q15583 401 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 CDKN3Q16667 212 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 ZNF394Q53GI3 561 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 FSCBQ5H9T9 825 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 PM20D1Q6GTS8 502 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 RBM44Q6ZP01 1051 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 SV2AQ7L0J3 742 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 CARNMT1Q8N4J0 409 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 OR13H1Q8NG92 308 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 RNF139Q8WU17 664 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 GRAMD1AQ96CP6 724 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 SEMA3CQ99985 751 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 TNMDQ9H2S6 317 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 KDM4CQ9H3R0 1056 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 USP29Q9HBJ7 922 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 FZD3Q9NPG1 666 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 EVA1BQ9NVM1 165 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 TFIP11Q9UBB9 837 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 SARDHQ9UL12 918 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 SPTBN1Q01082 2364 aaKnown RBP13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 CREBBPQ92793 2442 aa13.17□□□□□ -0.3
C1GALT1-207ENST00000476068 ZFC3H1O60293 1989 aaKnown RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 CLEC18AA5D8T8 446 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 TULP2O00295 520 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 SCAMP1O15126 338 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 SLC31A1O15431 190 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 SLC7A4O43246 635 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 PPP6R2O75170 966 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 ITGA2BP08514 1039 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 PDX1P52945 283 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 ECT2LQ008S8 904 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 CDH18Q13634 790 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 ELAVL3Q14576 367 aaKnown RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 DRAP1Q14919 205 aaPredicted RBP13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 KMT5BQ4FZB7 885 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 CLEC18BQ6UXF7 455 aa13.16□□□□□ -0.3
C1GALT1-207ENST00000476068 EFL1Q7Z2Z2 1120 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms