RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 NSMCE1Q8WV22 266 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 ART4Q93070 314 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 RTP4Q96DX8 246 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 OLFM3Q96PB7 478 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 VAT1Q99536 393 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 LRRC3Q9BY71 257 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 SFXN1Q9H9B4 322 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 TMEM248Q9NWD8 314 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 NEU2Q9Y3R4 380 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 HCFC2Q9Y5Z7 792 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 CPQQ9Y646 472 aa12.56□□□□□ -0.4
MRPL55-227ENST00000475832 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 IGLV3-10A0A075B6K4 115 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 CCDC195A0A1B0GUA6 201 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 C5orf60A6NFR6 353 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 E7EVH7 732 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 DFFAO00273 331 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 LINC01565O15544 149 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 OPHN1O60890 802 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 CLDN11O75508 207 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GCATO75600 419 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 RFPL2O75678 378 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 MAP3K6O95382 1288 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GLP2RO95838 553 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 RHOP08100 348 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 KCNA5P22460 613 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 RPL22P35268 128 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 ITGA8P53708 1063 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 SARNPP82979 210 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 DLX2Q07687 328 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GALNT2Q10471 571 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 SLC10A2Q12908 348 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 PRKD1Q15139 912 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 ANO4Q32M45 955 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 ITPRIPL1Q6GPH6 555 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GAREM2Q75VX8 874 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 C14orf80Q86SX3 495 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 HOOK3Q86VS8 718 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 PPIL6Q8IXY8 311 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GSPT2Q8IYD1 628 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 UMODL1-AS1Q8N2C9 162 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 SMG7Q92540 1137 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 HDAC11Q96DB2 347 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 PRMT1Q99873 361 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 FRMD8Q9BZ67 464 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 RNF38Q9H0F5 515 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GKN1Q9NS71 199 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 CLDND1Q9NY35 253 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 GRHL1Q9NZI5 618 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 SEPT10Q9P0V9 454 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 XPO7Q9UIA9 1087 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 TRHDEQ9UKU6 1024 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 AGO1Q9UL18 857 aaKnown RBP12.55□□□□□ -0.4
MRPL55-227ENST00000475832 SHOC2Q9UQ13 582 aa12.55□□□□□ -0.4
MRPL55-227ENST00000475832 A0A0A0MRY4 1105 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GOLGA6CA6NDK9 693 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GOLGA6BA6NDN3 693 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GFRA3O60609 400 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 RAMP2O60895 175 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 TBX10O75333 385 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GOLGA6DP0CG33 693 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 MYBL2P10244 700 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CCNCP24863 283 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 OR1E1P30953 314 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CHKAP35790 457 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 FDFT1P37268 417 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 ETFBP38117 255 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GARSP41250 739 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 LMAN1P49257 510 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 PTPN5P54829 565 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GDF10P55107 478 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CDH4P55283 916 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 YBEYP58557 167 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 BASP1P80723 227 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 PPIDQ08752 370 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 ZNF177Q13360 481 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 PARP15Q460N3 678 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 C6orf118Q5T5N4 469 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 VN1R2Q8NFZ6 395 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 P2RY11Q96G91 374 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CELF6Q96J87 481 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 SPATA13Q96N96 652 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 TSGA13Q96PP4 275 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CYP2S1Q96SQ9 504 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 RUFY1Q96T51 708 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 LGMNQ99538 433 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 C10orf88Q9H8K7 445 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 USP29Q9HBJ7 922 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms