RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 THAP9Q9H5L6 903 aa6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 C14orf119Q9NWQ9 140 aa6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 H2AFY2Q9P0M6 372 aaPredicted RBP6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDHGA8Q9Y5G5 932 aa6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 NPFFR2Q9Y5X5 522 aa6.15□□□□□ -1.43
ECHDC1-215ENST00000475319 XRN1Q8IZH2 1706 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 NHSL1Q5SYE7 1610 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 NCANO14594 1321 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 A0A1B0GWJ7 208 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 A8MVJ9 347 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 A8MX80 341 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 EVPLLA8MZ36 301 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PRSS44E7EML9 344 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 H0Y858 1186 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 H3BUI4 141 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ACOX3O15254 700 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ADCY6O43306 1168 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PI15O43692 258 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 SSX5O60225 188 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 NIPSNAP2O75323 286 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CLN5O75503 358 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PRAMEF1O95521 474 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 OAS1P00973 400 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 SOD2P04179 222 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CD3EP07766 207 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 TFPTP0C1Z6 253 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PRKAR1AP10644 381 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 SPINK2P20155 84 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CXCR2P25025 360 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 DNAJB1P25685 340 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 EEF1GP26641 437 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 HOXA6P31267 233 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 HADHAP40939 763 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 HARS2P49590 506 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CSNK2BP67870 215 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 DLG4P78352 724 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PRAMEP78395 509 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PICALMQ13492 652 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PDE1CQ14123 709 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GRM3Q14832 879 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 EFTUD2Q15029 972 aaKnown RBP eCLIP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GEN1Q17RS7 908 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 KCTD21Q4G0X4 260 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 VWA3BQ502W6 1294 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 TMEM240Q5SV17 173 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 C6orf163Q5TEZ5 329 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GPR142Q7Z601 462 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ZER1Q7Z7L7 766 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GLRX5Q86SX6 157 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CROCCP2Q86T23 111 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 FBXO11Q86XK2 927 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CCDC103Q8IW40 242 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 DIS3L2Q8IYB7 885 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 TBC1D21Q8IYX1 336 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 RTKN2Q8IZC4 609 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CAMKK1Q8N5S9 505 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GOT1L1Q8NHS2 421 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 GRK7Q8WTQ7 553 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 E2F7Q96AV8 911 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 DYDC2Q96IM9 177 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CCDC43Q96MW1 224 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 RUNDC3BQ96NL0 473 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 INPP4AQ96PE3 977 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ZNF317Q96PQ6 595 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 RANBP9Q96S59 729 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 MYD88Q99836 296 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 FERMT1Q9BQL6 677 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 DESI2Q9BSY9 194 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 NUP85Q9BW27 656 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 MRPS26Q9BYN8 205 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 CELF4Q9BZC1 486 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 RBM38Q9H0Z9 239 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 WDR6Q9NNW5 1121 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 TUFT1Q9NNX1 390 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 LZTFL1Q9NQ48 299 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 USP40Q9NVE5 1235 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 SYBUQ9NX95 663 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ZDHHC7Q9NXF8 308 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 STX18Q9P2W9 335 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 USP15Q9Y4E8 981 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ST14Q9Y5Y6 855 aa6.14□□□□□ -1.43
ECHDC1-215ENST00000475319 ADCY9O60503 1353 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PCDH11YQ9BZA8 1340 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 TRAFD1O14545 582 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 SIGLEC6O43699 453 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 CCDC22O60826 627 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 LTFP02788 710 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 FUCA1P04066 466 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 IFNA16P05015 189 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 ZCCHC18P0CG32 403 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 LCP1P13796 627 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 RAB6AP20340 208 aa6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 LPOP22079 712 aaPredicted RBP6.13□□□□□ -1.43
ECHDC1-215ENST00000475319 PTX3P26022 381 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms